RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GDI2P50395 445 aaKnown RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF81P51508 661 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 PSG4Q00888 419 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 SCGB2A2Q13296 93 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 TAF11Q15544 211 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF718Q3SXZ3 478 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 FAM27BQ5VT28 67 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 FAHD2BQ6P2I3 314 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 THSD4Q6ZMP0 1018 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 MEX3DQ86XN8 651 aaKnown RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 OR2T12Q8NG77 320 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 IPCEF1Q8WWN9 437 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-206ENST00000466532 BPIFA2Q96DR5 249 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 FAHD2AQ96GK7 314 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 RBP7Q96R05 134 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 SAP30LQ9HAJ7 183 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 A4GNTQ9UNA3 340 aa16.31■□□□□ 0.2
COL9A3-206ENST00000466532 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 A0A0A6YYJ9 748 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 CLDN25C9JDP6 229 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 VENTXO95231 258 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 PNPP00491 289 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
COL9A3-206ENST00000466532 MPV17P39210 176 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 SELENOWP63302 87 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 HFEQ30201 348 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 THEM4Q5T1C6 240 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 ACSM5Q6NUN0 579 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 UNQ6126/PRO20091Q6UXV3 157 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 IGFN1Q86VF2 1251 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 MICU2Q8IYU8 434 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 CLDN22Q8N7P3 220 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 SLC25A40Q8TBP6 338 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 RAB39BQ96DA2 213 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 MARS2Q96GW9 593 aaKnown RBP16.3■□□□□ 0.2
COL9A3-206ENST00000466532 FGFR1OP2Q9NVK5 253 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 WIPI2Q9Y4P8 454 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 CACNG2Q9Y698 323 aa16.3■□□□□ 0.2
COL9A3-206ENST00000466532 PLSCR5A0PG75 271 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 ELOVL7A1L3X0 281 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 HTR3EA5X5Y0 456 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 SPRY3O43610 288 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 SASH3O75995 380 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 MPZL1O95297 269 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 IGHMP01871 453 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 CST2P09228 141 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 LAP3P28838 519 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 YAP1P46937 504 aaKnown RBP16.29■□□□□ 0.2
COL9A3-206ENST00000466532 CTXN1P60606 82 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 TMEM255AQ5JRV8 349 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 FAM209AQ5JX71 171 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 CGB2Q6NT52 195 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 RFPL4BQ6ZWI9 263 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 ALDH16A1Q8IZ83 802 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 SEMA6DQ8NFY4 1073 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 FNDC8Q8TC99 324 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 LZICQ8WZA0 190 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 ELMOD3Q96FG2 381 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 TIMD4Q96H15 378 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 OR2H1Q9GZK4 316 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 OR2J1Q9GZK6 312 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 WNT5BQ9H1J7 359 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 G6PC2Q9NQR9 355 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 RHCGQ9UBD6 479 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 NBEAL1Q6ZS30 2694 aa16.29■□□□□ 0.2
COL9A3-206ENST00000466532 TRAV27A0A087WT01 109 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 A0A1W2PPL8 197 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 PLPP2O43688 288 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 DEAF1O75398 565 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-206ENST00000466532 RGS9O75916 674 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-206ENST00000466532 IGHV1-46P01743 117 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 MAKP20794 623 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 FUT4P22083 530 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 GUCA1AP43080 201 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-206ENST00000466532 MMP15P51511 669 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 MBNL2Q5VZF2 373 aaKnown RBP16.28■□□□□ 0.2
COL9A3-206ENST00000466532 FAM205BPQ63HN1 556 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 NRMQ8IXM6 262 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 LRRC75AQ8NAA5 344 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 OR51A7Q8NH64 312 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 ABHD4Q8TB40 342 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 KLF14Q8TD94 323 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-206ENST00000466532 RAB1CQ92928 201 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 TIMM10BQ9Y5J6 103 aa16.28■□□□□ 0.2
COL9A3-206ENST00000466532 LOC105371242A0A075B767 164 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 ZSCAN5BA6NJL1 495 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 IGHV2-5P01817 119 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 PCBD1P61457 104 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 PPP1CBP62140 327 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 TRAM2Q15035 370 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 ZNF774Q6NX45 483 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 C12orf54Q6X4T0 127 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 C1orf229Q6ZS94 237 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-206ENST00000466532 FOXL2NBQ6ZUU3 175 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 VTCN1Q7Z7D3 282 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 C1orf174Q8IYL3 243 aa16.27■□□□□ 0.2
COL9A3-206ENST00000466532 OFCC1Q8IZS5 231 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms