RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 A0A0J9YW62 118 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 PLPP3O14495 311 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 TNFSF11O14788 317 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 HPNP05981 417 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 HIST1H1CP16403 213 aaKnown RBP16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF17P17021 662 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 NOS3P29474 1203 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 THBS2P35442 1172 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 MAP2K6P52564 334 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 CLDN15P56746 228 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 CTXN1P60606 82 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 CXADRP78310 365 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 CD83Q01151 205 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 PYHIN1Q6K0P9 492 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 SFXN4Q6P4A7 337 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ARL9Q6T311 187 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 LRRC69Q6ZNQ3 347 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ABHD4Q8TB40 342 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ZFAND1Q8TCF1 268 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 RASD2Q96D21 266 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 NRIP3Q9NQ35 241 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 B4GALT7Q9UBV7 327 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 IGHV3-15A0A0B4J1V0 119 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 ANKRD61A6NGH8 418 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 MS4A18H0YCH9 400 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 CDK2AP1O14519 115 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 CD1AP06126 327 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 PITPNBP48739 271 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 PRPS1P60891 318 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 RRAS2P62070 204 aaPredicted RBP16.61■□□□□ 0.25
CAPN3-209ENST00000466222 RAC1P63000 192 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 SGCBQ16585 318 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 MS4A18Q3C1V0 323 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 DMKNQ6E0U4 476 aaPredicted RBP16.61■□□□□ 0.25
CAPN3-209ENST00000466222 B3GLCTQ6Y288 498 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 WDFY1Q8IWB7 410 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 OR4K13Q8NH42 304 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 ZPLD1Q8TCW7 415 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 UPRTQ96BW1 309 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 Q96M85 177 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 TBX5Q99593 518 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 HDHD2Q9H0R4 259 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 OR51V1Q9H2C8 321 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 LUZP4Q9P127 313 aa16.61■□□□□ 0.25
CAPN3-209ENST00000466222 PCDHGA9Q9Y5G4 932 aaKnown RBP16.61■□□□□ 0.25
CAPN3-209ENST00000466222 TRAV1-2A0A0B4J238 106 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 INMT-MINDY4F8WBC2 141 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ZNHIT1O43257 154 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ARHGEF9O43307 516 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ARSBP15848 533 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 GZMKP49863 264 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF85Q03923 595 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 FAPQ12884 760 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 TNK1Q13470 666 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 C5orf46Q6UWT4 87 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 UNQ6494/PRO21346Q6UXR6 183 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 DPY19L2P2Q6ZN68 376 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 TMPPEQ6ZT21 453 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 CEACAM19Q7Z692 300 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 GGNQ86UU5 652 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 NR2C2APQ86WQ0 139 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SYS1Q8N2H4 156 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ZADH2Q8N4Q0 377 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 YIPF7Q8N8F6 280 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 POMGNT2Q8NAT1 580 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SDR9C7Q8NEX9 313 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 MRPL48Q96GC5 212 aaKnown RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 C4orf36Q96KX1 117 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 MRPL39Q9NYK5 338 aaKnown RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 RABL2AQ9UBK7 228 aaPredicted RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ZMIZ1Q9ULJ6 1067 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 RABL2BQ9UNT1 228 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 MRPS18CQ9Y3D5 142 aaKnown RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 PIEZO2Q9H5I5 2752 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 TRAV17A0A0B4J275 112 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 A0A0G2JMP0 313 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 A0A0X1KG70 313 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SULT2B1O00204 365 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 EIF1AYO14602 144 aaKnown RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 CLUP10909 449 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SLC6A1P30531 599 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 SLC16A1P53985 500 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ACTA2P62736 377 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 ACTG2P63267 376 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 MAB21L1Q13394 359 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 CRMP1Q14194 572 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 HYAL4Q2M3T9 481 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 PLXDC2Q6UX71 529 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 IGFL3Q6UXB1 125 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 BAIAP2L2Q6UXY1 529 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 H1FNTQ75WM6 255 aaPredicted RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 FAM122BQ7Z309 247 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 OR4M2Q8NGB6 313 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 OR4M1Q8NGD0 313 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 OR52E2Q8NGJ4 325 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 AKAP1Q92667 903 aaKnown RBP eCLIP16.6■□□□□ 0.25
CAPN3-209ENST00000466222 MIB2Q96AX9 1013 aa16.6■□□□□ 0.25
CAPN3-209ENST00000466222 TSPAN32Q96QS1 320 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms