RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CNR1P21554 472 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 GDI1P31150 447 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 HRH1P35367 487 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 SERPINB5P36952 375 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 BEX3Q00994 111 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 HMGCS1Q01581 520 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 SRSF5Q13243 272 aaKnown RBP2.19□□□□□ -2.06
SMC4-205ENST00000465563 TGFBIQ15582 683 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 CHRNA6Q15825 494 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 UBE2SQ16763 222 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 VPS26BQ4G0F5 336 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 LRRC66Q68CR7 880 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 NANOGP8Q6NSW7 305 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 METAP1DQ6UB28 335 aaPredicted RBP2.19□□□□□ -2.06
SMC4-205ENST00000465563 CERS6Q6ZMG9 384 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 H2AFVQ71UI9 128 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 PEX26Q7Z412 305 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 PDIK1LQ8N165 341 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 CEP112Q8N8E3 955 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 Q8N976 141 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 OR10R2Q8NGX6 335 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 ACMSDQ8TDX5 336 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 STMN2Q93045 179 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 DNAJC19Q96DA6 116 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 CHAC1Q9BUX1 264 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 OR51M1Q9H341 326 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 DCAF16Q9NXF7 216 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 PCYOX1Q9UHG3 505 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 NSD2O96028 1365 aa2.19□□□□□ -2.06
SMC4-205ENST00000465563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.19□□□□□ -2.06
SMC4-205ENST00000465563 NFASCO94856 1347 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 MN1Q10571 1320 aaPredicted RBP2.18□□□□□ -2.06
SMC4-205ENST00000465563 AKNAQ7Z591 1439 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 IGLV11-55A0A075B6I3 123 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 A0A0B4J2A0 478 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 PRSS37A4D1T9 235 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 XKRYO14609 159 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 CHST1O43916 411 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 EEDO75530 441 aaKnown RBP2.18□□□□□ -2.06
SMC4-205ENST00000465563 CHMLP26374 656 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 CDKN1BP46527 198 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 ACLYP53396 1101 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 CDH6P55285 790 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 SLC7A9P82251 487 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 PRSS8Q16651 343 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 ARMC12Q5T9G4 340 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 Q6ZR03 302 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 NEGR1Q7Z3B1 354 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 PCP2Q8IVA1 136 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 LKAAEAR1Q8TD35 194 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 GEMIN6Q8WXD5 167 aaKnown RBP2.18□□□□□ -2.06
SMC4-205ENST00000465563 PIK3IP1Q96FE7 263 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 ATP5SQ99766 215 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 LINC00597Q9H2U6 94 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 RPF2Q9H7B2 306 aaKnown RBP2.18□□□□□ -2.06
SMC4-205ENST00000465563 ANKRA2Q9H9E1 313 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 SIRT7Q9NRC8 400 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 SHPKQ9UHJ6 478 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 ING4Q9UNL4 249 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 PSG8Q9UQ74 426 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 CAMTA1Q9Y6Y1 1673 aa2.18□□□□□ -2.06
SMC4-205ENST00000465563 CENPJQ9HC77 1338 aaPredicted RBP2.17□□□□□ -2.06
SMC4-205ENST00000465563 HIDE1A8MVS5 230 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 RAB29O14966 203 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 RNF13O43567 381 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 CIB2O75838 187 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 TLX1NBP0CAT3 122 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 NPY1RP25929 384 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 SLC25A11Q02978 314 aaKnown RBP2.17□□□□□ -2.06
SMC4-205ENST00000465563 SMARCB1Q12824 385 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 ZBED5Q49AG3 693 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 PRAMEF20Q5VT98 475 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 SLC8B1Q6J4K2 584 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 ZNF493Q6ZR52 646 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 STRADAQ7RTN6 431 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 RHEBL1Q8TAI7 183 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 ZFP90Q8TF47 636 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 KIFAP3Q92845 792 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 P2RX4Q99571 388 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 SLC40A1Q9NP59 571 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 RFNGQ9Y644 331 aa2.17□□□□□ -2.06
SMC4-205ENST00000465563 USP47Q96K76 1375 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 IGKV3D-11A0A0A0MRZ8 115 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 TRBV11-1A0A0K0K1C0 115 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 F6UB75 175 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 DNALI1O14645 258 aaPredicted RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 ERLIN1O75477 346 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 AIFM1O95831 613 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 GNAO1P09471 354 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 TNNI1P19237 187 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 AK4P27144 223 aaPredicted RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 OTX1P32242 354 aaPredicted RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 NAA10P41227 235 aaPredicted RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 TNNT2P45379 298 aaPredicted RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 TMED10P49755 219 aaKnown RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 NUTF2P61970 127 aaKnown RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 YWHAGP61981 247 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMC4-205ENST00000465563 MXD1Q05195 221 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 PPP1R7Q15435 360 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 MRPL23Q16540 153 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms