RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZNF69Q9UC07 566 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 CGGBP1Q9UFW8 167 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 POLR3KQ9Y2Y1 108 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 NPTNQ9Y639 398 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 LOC100509620A0A075B734 347 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 A0A1W2PRG6 482 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 C5orf49A4QMS7 147 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 TRMUO75648 421 aaKnown RBP17.52■□□□□ 0.4
CPSF7-209ENST00000463244 F13BP05160 661 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 ACADSP16219 412 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 CDAP32320 146 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 LIPAP38571 399 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 UGT2B15P54855 530 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 DEFA6Q01524 100 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 SPRNQ5BIV9 151 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 KLF17Q5JT82 389 aaPredicted RBP17.52■□□□□ 0.4
CPSF7-209ENST00000463244 HDDC2Q7Z4H3 204 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 C1orf174Q8IYL3 243 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 VANGL1Q8TAA9 524 aaPredicted RBP17.52■□□□□ 0.4
CPSF7-209ENST00000463244 GEMIN6Q8WXD5 167 aaKnown RBP17.52■□□□□ 0.4
CPSF7-209ENST00000463244 GPA33Q99795 319 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 NPHS2Q9NP85 383 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 KLHL21Q9UJP4 597 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 ZDHHC8Q9ULC8 765 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 UGT2A1Q9Y4X1 527 aa17.52■□□□□ 0.4
CPSF7-209ENST00000463244 WNK1Q9H4A3 2382 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 ERLIN1O75477 346 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 TGDSO95455 350 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 SLC2A10O95528 541 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 IGHV2-70P01814 119 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 IGHMP01871 453 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 CD55P08174 381 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 GDI2P50395 445 aaKnown RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 DAP3P51398 398 aaKnown RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 ZNF154Q13106 437 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 HNRNPA0Q13151 305 aaKnown RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 RUNDC3AQ59EK9 446 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 RFPL4BQ6ZWI9 263 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 BCL6BQ8N143 479 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 AKR7LQ8NHP1 331 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 NMD3Q96D46 503 aaKnown RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 ZNF48Q96MX3 618 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-209ENST00000463244 DIRC2Q96SL1 478 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 PRSS27Q9BQR3 290 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 SMURF2Q9HAU4 748 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 DCAF16Q9NXF7 216 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 AUP1Q9Y679 476 aa17.51■□□□□ 0.39
CPSF7-209ENST00000463244 TRAPPC2LH3BP13 241 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 H3BSA7 217 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 ICMTO60725 284 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 RNASE1P07998 156 aaKnown RBP17.5■□□□□ 0.39
CPSF7-209ENST00000463244 CD247P20963 164 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 IDH3AP50213 366 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 MAGOHP61326 146 aaKnown RBP17.5■□□□□ 0.39
CPSF7-209ENST00000463244 PSG4Q00888 419 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 BAMBIQ13145 260 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 CYP51A1Q16850 503 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 ABHD4Q8TB40 342 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 EBF4Q9BQW3 602 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 INIPQ9NRY2 104 aa17.5■□□□□ 0.39
CPSF7-209ENST00000463244 STX18Q9P2W9 335 aaKnown RBP17.5■□□□□ 0.39
CPSF7-209ENST00000463244 IGKV1D-43A0A0B4J1Z2 117 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 MT-ND1P03886 318 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 ZNF12P17014 697 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 PPP1CBP62140 327 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 ERVK-25P63136 954 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 IL13RA1P78552 427 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 FMODQ06828 376 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 AGKQ53H12 422 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 ZMAT1Q5H9K5 638 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 ARMC4Q5T2S8 1044 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 SPICQ8N5J4 248 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 C7orf26Q96N11 449 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 DCLRE1CQ96SD1 692 aaKnown RBP17.49■□□□□ 0.39
CPSF7-209ENST00000463244 CCDC28BQ9BUN5 200 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 PATZ1Q9HBE1 687 aaKnown RBP17.49■□□□□ 0.39
CPSF7-209ENST00000463244 MSL2Q9HCI7 577 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 EGFL7Q9UHF1 273 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 RAB21Q9UL25 225 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 INSIG2Q9Y5U4 225 aa17.49■□□□□ 0.39
CPSF7-209ENST00000463244 DOCK11Q5JSL3 2073 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 POM121CA8CG34 1229 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 A8MXK9 166 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 CLDN34H7C241 214 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 NGFP01138 241 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 SBK2P0C263 348 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 FUT1P19526 365 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 AQP2P41181 271 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 SEC61A1P61619 476 aaKnown RBP17.48■□□□□ 0.39
CPSF7-209ENST00000463244 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-209ENST00000463244 SELPLGQ14242 412 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 SGCAQ16586 387 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 TMEM155Q4W5P6 130 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 FAM27BQ5VT28 67 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 PATL1Q86TB9 770 aaKnown RBP17.48■□□□□ 0.39
CPSF7-209ENST00000463244 KLHL36Q8N4N3 616 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 NSMAFQ92636 917 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 HDAC2Q92769 488 aaKnown RBP17.48■□□□□ 0.39
CPSF7-209ENST00000463244 SLC25A28Q96A46 364 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 TAMM41Q96BW9 452 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms