RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	SIX1	Q15475	284 aa	Predicted RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	DGUOK	Q16854	277 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	C14orf28	Q4W4Y0	310 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	STPG1	Q5TH74	334 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	GFI1B	Q5VTD9	330 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	C9orf135	Q5VTT2	229 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	PGAP1	Q75T13	922 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	APLF	Q8IW19	511 aa	Predicted RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	AQP11	Q8NBQ7	271 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	TMEM104	Q8NE00	496 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	LRRC20	Q8TCA0	184 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	PHOSPHO2	Q8TCD6	241 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	TMEM190	Q8WZ59	177 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	OPALIN	Q96PE5	141 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	MRPL45	Q9BRJ2	306 aa	Known RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	TMEM175	Q9BSA9	504 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	HINT2	Q9BX68	163 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	HCAR1	Q9BXC0	346 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	TMEM59	Q9BXS4	323 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	NAA50	Q9GZZ1	169 aa	Known RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	PARL	Q9H300	379 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	RBKS	Q9H477	322 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	MOB1A	Q9H8S9	216 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	RETN	Q9HD89	108 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	ZNF302	Q9NR11	478 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	GPATCH2L	Q9NWQ4	482 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	MYEF2	Q9P2K5	600 aa	Known RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	CTSF	Q9UBX1	484 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	CLN8	Q9UBY8	286 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	STAP1	Q9ULZ2	295 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	DDX19B	Q9UMR2	479 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	FLVCR2	Q9UPI3	526 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	GAB2	Q9UQC2	676 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	SLC17A4	Q9Y2C5	497 aa		2.56	□□□□□ -2
FXR1-204	ENST00000461044	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044	SPEN	Q96T58	3664 aa	Known RBP	2.56	□□□□□ -2
FXR1-204	ENST00000461044		A0A1B0GWB2	263 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	TMEM120B	A0PK00	339 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	ZNF705E	A8MWA4	302 aa	Predicted RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044		E7ESA3	106 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	DCTN6	O00399	190 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GOSR2	O14653	212 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	SCAMP2	O15127	329 aa	Known RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	POLR1C	O15160	346 aa	Predicted RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	MCM3AP	O60318	1980 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	EIF4E2	O60573	245 aa	Known RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	GPX5	O75715	221 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	ZFAND5	O76080	213 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GAS8-AS1	O95177	125 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	APOA1	P02647	267 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	IFNW1	P05000	195 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GATA1	P15976	413 aa	Predicted RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	EIF2S2	P20042	333 aa	Known RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	BCL3	P20749	454 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	NF1	P21359	2839 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	SPR	P35270	261 aa	Predicted RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	CFHR2	P36980	270 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	LEP	P41159	167 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	MAGEA9	P43362	315 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GSK3B	P49841	420 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	ATP4B	P51164	291 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	CRISP1	P54107	249 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	BID	P55957	195 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	YWHAG	P61981	247 aa	Known RBP eCLIP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	RPS15A	P62244	130 aa	Known RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	GNB1	P62873	340 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	TNNC1	P63316	161 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	SRPX	P78539	464 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	LCN2	P80188	198 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	ATR	Q13535	2644 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	ABRAXAS2	Q15018	415 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	LTB4R	Q15722	352 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	C17orf58	Q2M2W7	97 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	EIPR1	Q53HC9	387 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	XKR4	Q5GH76	650 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GPRC6A	Q5T6X5	926 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GPR107	Q5VW38	600 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	STUM	Q69YW2	141 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	PDPK2P	Q6A1A2	396 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	OR52E8	Q6IFG1	317 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	STXBP4	Q6ZWJ1	553 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	SPATA24	Q86W54	205 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	CD302	Q8IX05	232 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	PIANP	Q8IYJ0	282 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GPR65	Q8IYL9	337 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	SVOPL	Q8N434	492 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	LYPD6B	Q8NI32	183 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	TCP10L	Q8TDR4	215 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	TCTEX1D2	Q8WW35	142 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	NAT6	Q93015	286 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	CIDEC	Q96AQ7	238 aa	Predicted RBP	2.55	□□□□□ -2
FXR1-204	ENST00000461044	C9orf85	Q96MD7	179 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	PGLYRP2	Q96PD5	576 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	TSSK3	Q96PN8	268 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	CSPG4P5	Q96PW8	444 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	CSMD1	Q96PZ7	3565 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	MFF	Q9GZY8	342 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	GBA3	Q9H227	469 aa		2.55	□□□□□ -2
FXR1-204	ENST00000461044	MMP28	Q9H239	520 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms