RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PTGES3Q15185 160 aaKnown RBP12.18□□□□□ -0.46
HDLBP-229ENST00000460826 RCN1Q15293 331 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 NRN1LQ496H8 165 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 C1QTNF12Q5T7M4 302 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 FAM27BQ5VT28 67 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 CBR4Q8N4T8 237 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 NRGNQ92686 78 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 SLC38A2Q96QD8 506 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 SLC29A1Q99808 456 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 RBM4BQ9BQ04 359 aaKnown RBP12.18□□□□□ -0.46
HDLBP-229ENST00000460826 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF416Q9BWM5 594 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 HCAR1Q9BXC0 346 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 NMNAT2Q9BZQ4 307 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 RACGAP1Q9H0H5 632 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
HDLBP-229ENST00000460826 MED20Q9H944 212 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 USE1Q9NZ43 259 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 FKBP7Q9Y680 259 aa12.18□□□□□ -0.46
HDLBP-229ENST00000460826 FAM183AA6NL82 134 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 ABCD4O14678 606 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 SURF4O15260 269 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 MGRN1O60291 552 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 UBL3O95164 117 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 GYPBP06028 91 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CD3EP07766 207 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CECR9P0C854 216 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CLUP10909 449 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-229ENST00000460826 MSR1P21757 451 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 PTDSS1P48651 473 aaKnown RBP12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CENPAP49450 140 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 NR1H2P55055 460 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 RAB39AQ14964 217 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 MEP1BQ16820 701 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 ADAM5Q6NVV9 412 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 DNM1P34Q6PK57 102 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-229ENST00000460826 GLB1L2Q8IW92 636 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 KBTBD8Q8NFY9 601 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 OR51L1Q8NGJ5 315 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 LILRB1Q8NHL6 650 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-229ENST00000460826 NANOS1Q8WY41 292 aaKnown RBP12.17□□□□□ -0.46
HDLBP-229ENST00000460826 C11orf40Q8WZ69 217 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 FBXO17Q96EF6 278 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 LIME1Q9H400 295 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 PLEKHF2Q9H8W4 249 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 RNF115Q9Y4L5 304 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
HDLBP-229ENST00000460826 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ZAR1LA6NP61 321 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ATP6V1G2-DDX39BF2Z307 99 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 M0R129 80 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 IFNGP01579 166 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 TFP02787 698 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 CST2P09228 141 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF32P17041 273 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 SPI1P17947 270 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 PTAFRP25105 342 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 CALCRP30988 508 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ARR3P36575 388 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ALDH3A2P51648 485 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 SLC36A2Q495M3 483 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 SLX4IPQ5VYV7 408 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF584Q8IVC4 421 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 FAM169BQ8N8A8 192 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 GABARAPL3Q9BY60 117 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 RIBC2Q9H4K1 309 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 RNF121Q9H920 327 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 TVP23BQ9NYZ1 205 aa12.16□□□□□ -0.46
HDLBP-229ENST00000460826 TVP23AA6NH52 213 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 RAB36O95755 333 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 HMGN1P05114 100 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 ZNF3P17036 446 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 GUCA1AP43080 201 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-229ENST00000460826 SLC25A1P53007 311 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 NAAAQ02083 359 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 KCNMB1Q16558 191 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 C3orf36Q3SXR2 165 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 ZIK1Q3SY52 487 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-229ENST00000460826 LPCAT4Q643R3 524 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 B3GLCTQ6Y288 498 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 ZBTB49Q6ZSB9 765 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 PROKR2Q8NFJ6 384 aa12.15□□□□□ -0.46
HDLBP-229ENST00000460826 BBS1Q8NFJ9 593 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms