RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GDI2P50395 445 aaKnown RBP19.43■□□□□ 0.7
PTPN4-207ENST00000460162 RAP1BP61224 184 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 RAP1AP62834 184 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 ERVK-25P63136 954 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 SRSF2Q01130 221 aaKnown RBP19.43■□□□□ 0.7
PTPN4-207ENST00000460162 SGCAQ16586 387 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 FOXL2NBQ6ZUU3 175 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 VTCN1Q7Z7D3 282 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 SLC15A3Q8IY34 581 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 C1orf174Q8IYL3 243 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 ZNF101Q8IZC7 436 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 POU5F2Q8N7G0 328 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 OR51F2Q8NH61 342 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 EIF3KQ9UBQ5 218 aaKnown RBP19.43■□□□□ 0.7
PTPN4-207ENST00000460162 GRIP1Q9Y3R0 1128 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 TRAV27A0A087WT01 109 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 WNT9BO14905 357 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 ICMTO60725 284 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 CST2P09228 141 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 MAKP20794 623 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 WNT5AP41221 380 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 CRYBB2P43320 205 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 CTXN1P60606 82 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 PSG4Q00888 419 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 GUCY1A3Q02108 690 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 GLO1Q04760 184 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 PRKCDQ05655 676 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 IGFN1Q86VF2 1251 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 RNF113BQ8IZP6 322 aaKnown RBP19.42■□□□□ 0.7
PTPN4-207ENST00000460162 AKR7LQ8NHP1 331 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 ACOT11Q8WXI4 607 aaPredicted RBP19.42■□□□□ 0.7
PTPN4-207ENST00000460162 OR2H1Q9GZK4 316 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 HIF1ANQ9NWT6 349 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 TREM2Q9NZC2 230 aa19.42■□□□□ 0.7
PTPN4-207ENST00000460162 TANC2Q9HCD6 1990 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 LOC100509620A0A075B734 347 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 IGHV1-69-2A0A0G2JMI3 117 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 C5orf49A4QMS7 147 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 EFCAB9A8MZ26 197 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 H3BSA7 217 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 CXCR6O00574 342 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 CDC14BO60729 498 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 ZNF682O95780 498 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 LAP3P28838 519 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 GCH1P30793 250 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 GUCA1AP43080 201 aaPredicted RBP19.41■□□□□ 0.7
PTPN4-207ENST00000460162 YAP1P46937 504 aaKnown RBP19.41■□□□□ 0.7
PTPN4-207ENST00000460162 PCBD1P61457 104 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 LMO4P61968 165 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 LIPEQ05469 1076 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 FHL1Q13642 323 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 ZNF718Q3SXZ3 478 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 IFI44LQ53G44 452 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 FAM209AQ5JX71 171 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 OAFQ86UD1 273 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 ALDH16A1Q8IZ83 802 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 CLDN22Q8N7P3 220 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 FAM156AQ8NDB6 213 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 OR51A7Q8NH64 312 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 IPCEF1Q8WWN9 437 aaPredicted RBP19.41■□□□□ 0.7
PTPN4-207ENST00000460162 SAP30LQ9HAJ7 183 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 DECR2Q9NUI1 292 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 RHCGQ9UBD6 479 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 CGGBP1Q9UFW8 167 aaPredicted RBP19.41■□□□□ 0.7
PTPN4-207ENST00000460162 SNX13Q9Y5W8 968 aa19.41■□□□□ 0.7
PTPN4-207ENST00000460162 J3KTA2 159 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 FFAR1O14842 300 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 COX4I1P13073 169 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 MSR1P21757 451 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 FUT4P22083 530 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 ZNF81P51508 661 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 MBNL2Q5VZF2 373 aaKnown RBP19.4■□□□□ 0.7
PTPN4-207ENST00000460162 RFPL4BQ6ZWI9 263 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 USP51Q70EK9 711 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 CBLL1Q75N03 491 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 OR13C2Q8NGS9 318 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 GTF3AQ92664 365 aaKnown RBP19.4■□□□□ 0.7
PTPN4-207ENST00000460162 MARS2Q96GW9 593 aaKnown RBP19.4■□□□□ 0.7
PTPN4-207ENST00000460162 HSH2DQ96JZ2 352 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 HOPXQ9BPY8 73 aaPredicted RBP19.4■□□□□ 0.7
PTPN4-207ENST00000460162 WNT5BQ9H1J7 359 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 ANKRD19PQ9H560 264 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 LPAR2Q9HBW0 351 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 ZNF446Q9NWS9 450 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 GMPR2Q9P2T1 348 aaKnown RBP19.4■□□□□ 0.7
PTPN4-207ENST00000460162 TIMM10BQ9Y5J6 103 aa19.4■□□□□ 0.7
PTPN4-207ENST00000460162 TRAV20A0A0B4J274 112 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 A0A1W2PPL8 197 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 PLSCR5A0PG75 271 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 CLDN25C9JDP6 229 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 NME4O00746 187 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 TPD52L2O43399 206 aaKnown RBP19.39■□□□□ 0.69
PTPN4-207ENST00000460162 PRSS23O95084 383 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 MMP15P51511 669 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 SLC7A2P52569 658 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 SCGB2A2Q13296 93 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 SPATA46Q5T0L3 261 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 ZNF730Q6ZMV8 503 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 MBOAT2Q6ZWT7 520 aa19.39■□□□□ 0.69
PTPN4-207ENST00000460162 SYT9Q86SS6 491 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms