RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CD302Q8IX05 232 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 MDS2Q8NDY4 140 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF502Q8TBZ5 544 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ACTRT1Q8TDG2 376 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ASB9Q96DX5 294 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 SMIM10Q96HG1 83 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 CATSPER2Q96P56 530 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF331Q9NQX6 463 aaPredicted RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 C15orf41Q9Y2V0 281 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 GMEB1Q9Y692 573 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 COMMD3-BMI1R4GMX3 469 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 MAP3K15Q6ZN16 1313 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 TRAV39A0A0B4J263 110 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 OR6C74A6NCV1 312 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 HIDE1A8MVS5 230 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 C6orf47O95873 294 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 FOLR1P15328 257 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF30P17039 623 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 EIF2S2P20042 333 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 PRKACBP22694 351 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CPN2P22792 545 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 OTX1P32242 354 aaPredicted RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 LONP1P36776 959 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CRISP3P54108 245 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 PIGGQ5H8A4 983 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 SOHLH1Q5JUK2 328 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 PPM1LQ5SGD2 360 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CCNJQ5T5M9 372 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CERS6Q6ZMG9 384 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 BZW1Q7L1Q6 419 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 SLC16A14Q7RTX9 510 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 TMCO2Q7Z6W1 182 aaPredicted RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 OR4A4PQ8NGN8 299 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 OR5B3Q8NH48 314 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 STARD8Q92502 1023 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CYYR1Q96J86 154 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 ARL5BQ96KC2 179 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 FAM210BQ96KR6 192 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 TSSK3Q96PN8 268 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 TGS1Q96RS0 853 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 MRPL37Q9BZE1 423 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CDC42EP4Q9H3Q1 356 aaKnown RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 C8orf33Q9H7E9 229 aaPredicted RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 DMAP1Q9NPF5 467 aaPredicted RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 KCNJ16Q9NPI9 418 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 AGPAT3Q9NRZ7 376 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 PTTG3PQ9NZH4 202 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 CHMP5Q9NZZ3 219 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 GCNT4Q9P109 453 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 VANGL2Q9ULK5 521 aa3.62□□□□□ -1.83
CCDC50-203ENST00000460064 PRG3Q9Y2Y8 225 aaPredicted RBP3.62□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF816-ZNF321PA0A0X1KG74 233 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 EIF3HO15372 352 aaKnown RBP eCLIP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 SS18L1O75177 396 aaPredicted RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 BGLAPP02818 100 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 SERPINA5P05154 406 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 PSG2P11465 335 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 GTF2E2P29084 291 aaKnown RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 HOXA9P31269 272 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 PLTPP55058 493 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 ADARB1P78563 741 aaKnown RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 HMGCS1Q01581 520 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 MERTKQ12866 999 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 CHRNA6Q15825 494 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 RSPO1Q2MKA7 263 aaPredicted RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 PDPK2PQ6A1A2 396 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 C22orf42Q6IC83 251 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 STRADAQ7RTN6 431 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF433Q8N7K0 673 aaPredicted RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 DUSP18Q8NEJ0 188 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 OR10R2Q8NGX6 335 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 LRRC58Q96CX6 371 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 LRRC39Q96DD0 335 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 SYNDIG1Q9H7V2 258 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 STK38LQ9Y2H1 464 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 COL16A1Q07092 1604 aaPredicted RBP3.61□□□□□ -1.83
CCDC50-203ENST00000460064 SCN2AQ99250 2005 aa3.61□□□□□ -1.83
CCDC50-203ENST00000460064 TRAV6A0A075B6T7 132 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 IGHV3-64DA0A0J9YX35 117 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 GLYATL1P3A0A0U1RQE8 302 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 SIRPB1O00241 398 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 CLPXO76031 633 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 UTS2O95399 124 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 AIFM1O95831 613 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 OTCP00480 354 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 IGLV2-23P01705 113 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ZDHHC11BP0C7U3 371 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 MYL2P10916 166 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ADRB3P13945 408 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 S100A5P33763 92 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 HRH1P35367 487 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 CXCL5P42830 114 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 SLC1A1P43005 524 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 CX3CR1P49238 355 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 SLC11A1P49279 550 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 NCBP2P52298 156 aaKnown RBP eCLIP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 RAB10P61026 200 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ZSCAN26Q16670 478 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 TTLL9Q3SXZ7 439 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 LIN9Q5TKA1 542 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms