RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CATSPERDQ86XM0 798 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 SFTPA2Q8IWL1 248 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PRSS35Q8N3Z0 413 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 METTL27Q8N6F8 245 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 GPR119Q8TDV5 335 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 GPX8Q8TED1 209 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TNFAIP8L1Q8WVP5 186 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TSLPQ969D9 159 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PNPLA2Q96AD5 504 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 CLIP3Q96DZ5 547 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TSSK2Q96PF2 358 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 SMAD5Q99717 465 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 PHF7Q9BWX1 381 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF768Q9H5H4 540 aaKnown RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 HEXA-AS1Q9H8Q6 139 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 FANCFQ9NPI8 374 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 SERINC1Q9NRX5 453 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 B3GALT5Q9Y2C3 310 aa7.97□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM184BQ9Y519 407 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-202ENST00000459727 DOCK9Q9BZ29 2069 aa7.96□□□□□ -1.13
HDAC3-202ENST00000459727 IGLV3-12A0A075B6K2 115 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 A0A1W2PNV4 684 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 LOC390937A0A1W2PQ73 354 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PLSCR5A0PG75 271 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR2M5A3KFT3 312 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 SHISA7A6NL88 538 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 VSTM2BA6NLU5 285 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 DISC1C4P0D8 188 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 C11orf98E9PRG8 122 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 H3BUI4 141 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 H7C1C5 153 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PSMD9O00233 223 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ETV2O00321 342 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 DCTN6O00399 190 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 B3GALNT1O75752 331 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 CYB5AP00167 134 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 HPXP02790 462 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ALDOBP05062 364 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 RRASP10301 218 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PPP3CBP16298 524 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 IGFBP3P17936 291 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 MPZP25189 248 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 RAD52P43351 418 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR1D4P47884 311 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ARRB1P49407 418 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 MMP16P51512 607 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 CLDN12P56749 244 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 LCN6P62502 163 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ZP2Q05996 745 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 DMWDQ09019 674 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 CAMK2BQ13554 666 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 C1orf100Q5SVJ3 147 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 LIN54Q6MZP7 749 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 FAHD2BQ6P2I3 314 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 KLHL24Q6TFL4 600 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 Q6ZS52 159 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 H1FNTQ75WM6 255 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 NDUFAF7Q7L592 441 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ADGRG3Q86Y34 549 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 SERPINA12Q8IW75 414 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 BEST4Q8NFU0 473 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR10H5Q8NGA6 315 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR11H4Q8NGC9 324 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR4C16Q8NGL9 310 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 OR13C3Q8NGS6 347 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 C8orf44Q96CB5 159 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 SLC25A36Q96CQ1 311 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 FAHD2AQ96GK7 314 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 MRGPRX4Q96LA9 322 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 LMF1Q96S06 567 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 CMKLR1Q99788 373 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PRRT1Q99946 306 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 DHRS9Q9BPW9 319 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 UQCC2Q9BRT2 126 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ABHD6Q9BV23 337 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 SLC7A5P2Q9GIP4 190 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 VN1R1Q9GZP7 353 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ATG5Q9H1Y0 275 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 C1orf198Q9H425 327 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 EXO5Q9H790 373 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 LMAN1LQ9HAT1 526 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 APMAPQ9HDC9 416 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PRMT8Q9NR22 394 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 ALKBH4Q9NXW9 302 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 SLC2A8Q9NY64 477 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 C19orf25Q9UFG5 118 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 MKL2Q9ULH7 1088 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 PPIEQ9UNP9 301 aaKnown RBP7.96□□□□□ -1.14
HDAC3-202ENST00000459727 MYO7AQ13402 2215 aa7.96□□□□□ -1.14
HDAC3-202ENST00000459727 TRAV18A0A075B6X5 111 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 A0A1W2PPL8 197 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 CIB4A0PJX0 185 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 A8MUA0 341 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 FTCDNL1E5RQL4 147 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 EIF1AYO14602 144 aaKnown RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RAB3DO95716 219 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 BPNT1O95861 308 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms