RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 OR51D1Q8NGF3 324 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 OR5T3Q8NGG3 340 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ASB12Q8WXK4 309 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 LRRC46Q96FV0 321 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 VSTM2LQ96N03 204 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 SLC25A21Q9BQT8 299 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 POFUT1Q9H488 388 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 GAREM1Q9H706 876 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 EXO5Q9H790 373 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 TMEM138Q9NPI0 162 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ZNF107Q9UII5 783 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 PURGQ9UJV8 347 aaKnown RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 PLCL2Q9UPR0 1127 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 PCNX3Q9H6A9 2034 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 TRAV18A0A075B6X5 111 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 TMEM265A0A087WTH1 108 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 LOC100289279A0A1B0GTE1 492 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 A6NCN8 305 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FAM171A2A8MVW0 826 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 DOK2O60496 412 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 KDM4BO94953 1096 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OR2F2O95006 317 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 KAT7O95251 611 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 CD3DP04234 171 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FCER2P06734 321 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ITGA5P08648 1049 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ACRP10323 421 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 CD37P11049 281 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ALOX5APP20292 161 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 CNR1P21554 472 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 HOXC12P31275 282 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ADPRHP54922 357 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 TAS2R19P59542 299 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OR2F1Q13607 317 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ZNF74Q16587 644 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 EMC4Q5J8M3 183 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 YOD1Q5VVQ6 348 aaPredicted RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 C11orf88Q6PI97 169 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 UQCC3Q6UW78 93 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 RNF44Q7L0R7 432 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 GABRG1Q8N1C3 465 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OR51A4Q8NGJ6 313 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OR5M8Q8NGP6 311 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OR10AC1Q8NH08 325 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 RERGQ96A58 199 aaPredicted RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 C4orf45Q96LM5 186 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 TSSK2Q96PF2 358 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 NEU1Q99519 415 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 G6PC3Q9BUM1 346 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 EDEM2Q9BV94 578 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 POTEKPQ9BYX7 375 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 NKX6-2Q9C056 277 aaPredicted RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 WDR76Q9H967 626 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 BIN3Q9NQY0 253 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ZNF346Q9UL40 294 aaKnown RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 VCANP13611 3396 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FREM3P0C091 2139 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 A0A1B0GTH9 108 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SERINC4A6NH21 518 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FAM74A7A6NL05 159 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 C4orf47A7E2U8 309 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 DCTN6O00399 190 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 PHYHO14832 338 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SCAMP1O15126 338 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 BCL2L11O43521 198 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SIGLEC6O43699 453 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 CSTAP01040 98 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 S100A8P05109 93 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 GP1BAP07359 652 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FBP1P09467 338 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ASAH2BP0C7U1 165 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 COX5BP10606 129 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 HLA-GP17693 338 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 RAB4AP20338 218 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 PTAFRP25105 342 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 GJA4P35212 333 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 AQP2P41181 271 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 GRK6P43250 576 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 KIR3DL2P43630 455 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 MC2RQ01718 297 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 CLN3Q13286 438 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 C2orf76Q3KRA6 126 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FAM74A3Q4VXF1 159 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 PRRT3Q5FWE3 981 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 GLT8D1Q68CQ7 371 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 PSRC1Q6PGN9 363 aaPredicted RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 NPSR1Q6W5P4 371 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 NUP54Q7Z3B4 507 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ZNF440Q8IYI8 595 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 ZNF676Q8N7Q3 588 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 RCBTB1Q8NDN9 531 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 BAHD1Q8TBE0 780 aaPredicted RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 DUSP19Q8WTR2 217 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FAM3CQ92520 227 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 FAM3DQ96BQ1 224 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 WDR13Q9H1Z4 485 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SLCO5A1Q9H2Y9 848 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms