RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SLC30A7Q8NEW0 376 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 OR10G2Q8NGC3 310 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 OR9Q2Q8NGE9 314 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 FGFBP3Q8TAT2 258 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 NABP1Q96AH0 204 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 FBXO17Q96EF6 278 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 BDH2Q9BUT1 245 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 SYT4Q9H2B2 425 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 RERGLQ9H628 205 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 NOX3Q9HBY0 568 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 IL20Q9NYY1 176 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 DNAJB9Q9UBS3 223 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 BAIAP2Q9UQB8 552 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 CMAHPQ9Y471 501 aa13.99□□□□□ -0.17
CD28-203ENST00000458610 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
CD28-203ENST00000458610 PRRC2AP48634 2157 aaKnown RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 H7C1C5 153 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 FKBP6O75344 327 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CIB2O75838 187 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 MMP7P09237 267 aaPredicted RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 OR4A8P0C604 315 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 THBS4P35443 961 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 GLRXP35754 106 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CDKN1AP38936 164 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CDKN2AP42771 156 aaKnown RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 RAD52P43351 418 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 LCN6P62502 163 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CBX1P83916 185 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 PPP1R8Q12972 351 aaKnown RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 SNTB2Q13425 540 aaKnown RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 EFNB3Q15768 340 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 C1orf174Q8IYL3 243 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 WFDC11Q8NEX6 87 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 CACNG6Q9BXT2 260 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 POLE4Q9NR33 117 aa13.98□□□□□ -0.17
CD28-203ENST00000458610 EIF3KQ9UBQ5 218 aaKnown RBP13.98□□□□□ -0.17
CD28-203ENST00000458610 H7C417 338 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 EBAG9O00559 213 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 DEAF1O75398 565 aaPredicted RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 SNAP29O95721 258 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 ERCC1P07992 297 aaPredicted RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 CTLA4P16410 223 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 ZNF32P17041 273 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 CENPAP49450 140 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 GDI2P50395 445 aaKnown RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 SELENOVP59797 346 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 LSM6P62312 80 aaKnown RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 SCRN3Q0VDG4 424 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 ADIPOQQ15848 244 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 SWI5Q1ZZU3 235 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 PABPC1L2AQ5JQF8 200 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 C11orf71Q6IPW1 123 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 KRT80Q6KB66 452 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 LEG1Q6P5S2 330 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 ARL9Q6T311 187 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 MYPOPQ86VE0 399 aaPredicted RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 OR4K13Q8NH42 304 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 HTRA1Q92743 480 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 TMUB1Q9BVT8 246 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 OR2H1Q9GZK4 316 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 NUAK2Q9H093 628 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 PLK3Q9H4B4 646 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 TBC1D23Q9NUY8 699 aa13.97□□□□□ -0.17
CD28-203ENST00000458610 PDP1Q9P0J1 537 aaPredicted RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 COA3Q9Y2R0 106 aaPredicted RBP13.97□□□□□ -0.17
CD28-203ENST00000458610 ANXA8P13928 327 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 HIST1H1CP16403 213 aaKnown RBP13.96□□□□□ -0.17
CD28-203ENST00000458610 STOMP27105 288 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 PCSK6P29122 969 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 EVX1P49640 407 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 DSCR9P59020 149 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 PSG4Q00888 419 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 GLO1Q04760 184 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 SLC36A3Q495N2 470 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 CLEC12AQ5QGZ9 265 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 PTCHD4Q6ZW05 846 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 ZNF584Q8IVC4 421 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 OR2T33Q8NG76 320 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 OR52E2Q8NGJ4 325 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 NRBF2Q96F24 287 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 Q96MF0 132 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 NMNAT3Q96T66 252 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 FEVQ99581 238 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 ZNF416Q9BWM5 594 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 TSSK6Q9BXA6 273 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 BCL2L14Q9BZR8 327 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 EGLN3Q9H6Z9 239 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 SRA1Q9HD15 236 aaKnown RBP13.96□□□□□ -0.17
CD28-203ENST00000458610 VNN3Q9NY84 501 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 NDRG4Q9ULP0 352 aaKnown RBP13.96□□□□□ -0.17
CD28-203ENST00000458610 B9D1Q9UPM9 204 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
CD28-203ENST00000458610 IFNGP01579 166 aa13.95□□□□□ -0.18
CD28-203ENST00000458610 COX5BP10606 129 aa13.95□□□□□ -0.18
CD28-203ENST00000458610 APEX1P27695 318 aaKnown RBP13.95□□□□□ -0.18
CD28-203ENST00000458610 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms