RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CSF3P09919 207 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 CR2P20023 1033 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 MLF2Q15773 248 aaPredicted RBP18.02■□□□□ 0.48
SNX27-204ENST00000458013 TOR2AQ5JU69 321 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 LHX6Q9UPM6 363 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 A0A1W2PRV1 198 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 TRABD2BA6NFA1 517 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 TMEM221A6NGB7 291 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 YIF1AO95070 293 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 UBE2G2P60604 165 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 OR8G1Q15617 311 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 GGTA1PQ4G0N0 100 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 CHST6Q9GZX3 395 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 LGALS8O00214 317 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 PSMB3P49720 205 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 ZMAT1Q5H9K5 638 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 PDLIM5Q96HC4 596 aaKnown RBP18.02■□□□□ 0.48
SNX27-204ENST00000458013 RRASP10301 218 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 TEAD1P28347 426 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 FCER1GP30273 86 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 MAP2K6P52564 334 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 THNSL2Q86YJ6 484 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 GCNT2Q8N0V5 402 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 RNF141Q8WVD5 230 aa18.02■□□□□ 0.48
SNX27-204ENST00000458013 C6orf106Q9H6K1 298 aaPredicted RBP18.02■□□□□ 0.48
SNX27-204ENST00000458013 DCTN6O00399 190 aa18.02■□□□□ 0.47
SNX27-204ENST00000458013 SLC39A13Q96H72 371 aa18.02■□□□□ 0.47
SNX27-204ENST00000458013 SHARPINQ9H0F6 387 aa18.02■□□□□ 0.47
SNX27-204ENST00000458013 FBXO8Q9NRD0 319 aa18.02■□□□□ 0.47
SNX27-204ENST00000458013 SLC5A6Q9Y289 635 aa18.02■□□□□ 0.47
SNX27-204ENST00000458013 GNB2P62879 340 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 CTU2Q2VPK5 515 aaKnown RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 VWA2Q5GFL6 755 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 VASH2Q86V25 355 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 CCDC74AQ96AQ1 378 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 CTSFQ9UBX1 484 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 NPPBP16860 134 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 C4orf17Q53FE4 359 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 ING1Q9UK53 422 aaPredicted RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 DGCR2P98153 550 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 DMWDQ09019 674 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 IFI44Q8TCB0 444 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 TRMT61AQ96FX7 289 aaKnown RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 SOD1P00441 154 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 ALOX5APP20292 161 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 UBE2IP63279 158 aaKnown RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 ZNF2Q9BSG1 426 aaPredicted RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 ESRP2Q9H6T0 727 aaKnown RBP18.01■□□□□ 0.47
SNX27-204ENST00000458013 A0A0A6YYJ9 748 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 BCORP1Q8N888 145 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 C15orf54Q8N8G6 183 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 SEMA6DQ8NFY4 1073 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 NEURL3Q96EH8 262 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 GON7Q9BXV9 100 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 NMES1Q9C002 83 aa18.01■□□□□ 0.47
SNX27-204ENST00000458013 ALOX12BO75342 701 aa18■□□□□ 0.47
SNX27-204ENST00000458013 EMDP50402 254 aa18■□□□□ 0.47
SNX27-204ENST00000458013 MFSD12Q6NUT3 480 aa18■□□□□ 0.47
SNX27-204ENST00000458013 OR52I2Q8NH67 350 aa18■□□□□ 0.47
SNX27-204ENST00000458013 SPHK1Q9NYA1 384 aa18■□□□□ 0.47
SNX27-204ENST00000458013 RAB19A4D1S5 217 aa18■□□□□ 0.47
SNX27-204ENST00000458013 C5orf49A4QMS7 147 aa18■□□□□ 0.47
SNX27-204ENST00000458013 OR2W5A6NFC9 320 aa18■□□□□ 0.47
SNX27-204ENST00000458013 TFAP2AP05549 437 aa18■□□□□ 0.47
SNX27-204ENST00000458013 HPNP05981 417 aa18■□□□□ 0.47
SNX27-204ENST00000458013 HIST1H1CP16403 213 aaKnown RBP18■□□□□ 0.47
SNX27-204ENST00000458013 IRS1P35568 1242 aa18■□□□□ 0.47
SNX27-204ENST00000458013 SOHLH1Q5JUK2 328 aa18■□□□□ 0.47
SNX27-204ENST00000458013 WDR5BQ86VZ2 330 aa18■□□□□ 0.47
SNX27-204ENST00000458013 OR13F1Q8NGS4 319 aa18■□□□□ 0.47
SNX27-204ENST00000458013 MS4A4AQ96JQ5 239 aa18■□□□□ 0.47
SNX27-204ENST00000458013 MED9Q9NWA0 146 aa18■□□□□ 0.47
SNX27-204ENST00000458013 ADAM29Q9UKF5 820 aa18■□□□□ 0.47
SNX27-204ENST00000458013 OR2A25A4D2G3 310 aa18■□□□□ 0.47
SNX27-204ENST00000458013 SEC14L6B5MCN3 397 aa18■□□□□ 0.47
SNX27-204ENST00000458013 S100A11P31949 105 aa18■□□□□ 0.47
SNX27-204ENST00000458013 SLC19A1P41440 591 aa18■□□□□ 0.47
SNX27-204ENST00000458013 BTG2P78543 158 aa18■□□□□ 0.47
SNX27-204ENST00000458013 PTCRAQ6ISU1 281 aaPredicted RBP18■□□□□ 0.47
SNX27-204ENST00000458013 PLA2G12AQ9BZM1 189 aa18■□□□□ 0.47
SNX27-204ENST00000458013 RBFOX1Q9NWB1 397 aaKnown RBP18■□□□□ 0.47
SNX27-204ENST00000458013 A3GALT2U3KPV4 340 aa18■□□□□ 0.47
SNX27-204ENST00000458013 ARL2-SNX15V9GYD0 113 aa18■□□□□ 0.47
SNX27-204ENST00000458013 GLCEO94923 617 aa18■□□□□ 0.47
SNX27-204ENST00000458013 SOX18P35713 384 aa18■□□□□ 0.47
SNX27-204ENST00000458013 PRSS36Q5K4E3 855 aa18■□□□□ 0.47
SNX27-204ENST00000458013 RPL7L1Q6DKI1 246 aaKnown RBP18■□□□□ 0.47
SNX27-204ENST00000458013 SPINT2O43291 252 aa18■□□□□ 0.47
SNX27-204ENST00000458013 TMEM200AQ86VY9 491 aa18■□□□□ 0.47
SNX27-204ENST00000458013 RAB22AQ9UL26 194 aa18■□□□□ 0.47
SNX27-204ENST00000458013 M0R082 166 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 QDPRP09417 244 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 LRRC56Q8IYG6 542 aaPredicted RBP17.99■□□□□ 0.47
SNX27-204ENST00000458013 MEX3AA1L020 520 aaKnown RBP17.99■□□□□ 0.47
SNX27-204ENST00000458013 ICOSLGO75144 302 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 CD1CP29017 333 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 EIF2DP41214 584 aaKnown RBP17.99■□□□□ 0.47
SNX27-204ENST00000458013 CCL4L1Q8NHW4 92 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 WBP2Q969T9 261 aa17.99■□□□□ 0.47
SNX27-204ENST00000458013 SLC35A4Q96G79 324 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms