RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ADIPOR1Q96A54 375 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 KTI12Q96EK9 354 aaPredicted RBP11.19□□□□□ -0.62
LINC00959-201ENST00000456581 C7orf50Q9BRJ6 194 aaKnown RBP11.19□□□□□ -0.62
LINC00959-201ENST00000456581 NMNAT2Q9BZQ4 307 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 SYT4Q9H2B2 425 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PLEKHA1Q9HB21 404 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PRODH2Q9UF12 536 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 BAIAP2Q9UQB8 552 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 SLC22A13Q9Y226 551 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 LY6G6EA0A0G2JKS1 128 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 BLACEA4D250 179 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 C11orf98E9PRG8 122 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 SIGLEC6O43699 453 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 TSPAN9O75954 239 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 NDUFB6O95139 128 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 ANXA2P07355 339 aaKnown RBP11.19□□□□□ -0.62
LINC00959-201ENST00000456581 IFNGR1P15260 489 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 NUP62P37198 522 aaPredicted RBP11.19□□□□□ -0.62
LINC00959-201ENST00000456581 CENPAP49450 140 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 LRRN1Q6UXK5 716 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 DPY19L2P2Q6ZN68 376 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 JAZF1Q86VZ6 243 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 C12orf10Q9HB07 376 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 TAS2R5Q9NYW4 299 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PTTG3PQ9NZH4 202 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 KCNG2Q9UJ96 466 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 U3KQA8 63 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 TRAV18A0A075B6X5 111 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 LOC100509620A0A075B734 347 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 FAM74A7A6NL05 159 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 GLCEO94923 617 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CD3DP04234 171 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CSN2P05814 226 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 ITGA5P08648 1049 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 AKR1C2P52895 323 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 SORDQ00796 357 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 AKR1C1Q04828 323 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 EGR4Q05215 589 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 Q499Y3 187 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 MARCH3Q86UD3 253 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF676Q8N7Q3 588 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 MIB2Q96AX9 1013 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 SHARPINQ9H0F6 387 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 AKIRIN1Q9H9L7 192 aaPredicted RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 OPN4Q9UHM6 478 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 FBXO4Q9UKT5 387 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 M0QYG6 137 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 ITGA10O75578 1167 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CFIP05156 583 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CTRB1P17538 263 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 RORAP35398 523 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 RBM34P42696 430 aaKnown RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 PPICP45877 212 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 PSMD4P55036 377 aaKnown RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 SEC61A1P61619 476 aaKnown RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CCL7P80098 99 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 LGALS3BPQ08380 585 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 ALKBH1Q13686 389 aaKnown RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 MESTQ5EB52 335 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CTRB2Q6GPI1 263 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 OR10K2Q6IF99 312 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 TMED4Q7Z7H5 227 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 FAM71CQ8NEG0 241 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 LHFPL5Q8TAF8 219 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 LCORQ96JN0 433 aaPredicted RBP11.18□□□□□ -0.62
LINC00959-201ENST00000456581 CHRNA10Q9GZZ6 450 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 APMAPQ9HDC9 416 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 UBQLN4Q9NRR5 601 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF337Q9Y3M9 751 aa11.18□□□□□ -0.62
LINC00959-201ENST00000456581 A0A1B0GX78 115 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ELOA3DA6NLF2 546 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 EFCAB7A8K855 629 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 GLSO94925 669 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 APOC3P02656 99 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 GTF2F2P13984 249 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 EPHA8P29322 1005 aaPredicted RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 CCKBRP32239 447 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 SKP2Q13309 424 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 EBPQ15125 230 aaKnown RBP11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ETFDHQ16134 617 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 MEP1BQ16820 701 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 HLA-BQ31612 363 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ELOA3BQ3SY89 546 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 LRRC37A5PQ49AS3 106 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ALG10Q5BKT4 473 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 FNDC7Q5VTL7 733 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 C11orf88Q6PI97 169 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 COX15Q7KZN9 410 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 PM20D2Q8IYS1 436 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 ELOA3Q8NG57 546 aa11.17□□□□□ -0.62
LINC00959-201ENST00000456581 OR1S1Q8NH92 325 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms