RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 GLSO94925 669 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 MPC2O95563 127 aa16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 PNPP00491 289 aa16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 TMIGD3P0DMS9 266 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF227Q86WZ6 799 aa16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 SCP2D1Q9UJQ7 156 aa16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 ARID1BQ8NFD5 2236 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-209ENST00000456560 RPS10-NUDT3A0A1W2PQS6 291 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 ANKUB1A6NFN9 424 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 K7ESF4 209 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 ACOT7O00154 380 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 HPXP02790 462 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 SPARCP09486 303 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 PTHLHP12272 177 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 GRK1Q15835 563 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 AANATQ16613 207 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 TMEM71Q6P5X7 295 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 BPHLQ86WA6 291 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC38A9Q8NBW4 561 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 OR8K3Q8NH51 312 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 TMEM234Q8WY98 164 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 CLDN23Q96B33 292 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 NPAS1Q99742 590 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 COQ3Q9NZJ6 369 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 ZNF224Q9NZL3 707 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 FLVCR2Q9UPI3 526 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC22A13Q9Y226 551 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 MS4A18H0YCH9 400 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 H3BSH0 61 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 KHDRBS3O75525 346 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 IL11P20809 199 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 FBXW4P57775 412 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 RAB14P61106 215 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 ZP4Q12836 540 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 MELKQ14680 651 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 MS4A18Q3C1V0 323 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 GLB1L2Q8IW92 636 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 ST8SIA1Q92185 356 aa16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 PPIEQ9UNP9 301 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-209ENST00000456560 XRCC3O43542 346 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 PRAF2O60831 178 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 DCNP07585 359 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 HLA-DOBP13765 273 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 DLX5P56178 289 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ASPHD2Q6ICH7 369 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 OR5M10Q6IEU7 315 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 SEZ6L2Q6UXD5 910 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 TSEN15Q8WW01 171 aaKnown RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 PPP1R14AQ96A00 147 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ABHD6Q9BV23 337 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 NKIRAS2Q9NYR9 191 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 FBXL3Q9UKT7 428 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ATXN7L1Q9ULK2 861 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 NPTNQ9Y639 398 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 EXPH5Q8NEV8 1989 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 C2orf72A6NCS6 295 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 TTLL8A6PVC2 850 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 TGM6O95932 706 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 CRABP1P29762 137 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 PTGS2P35354 604 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ADAM8P78325 824 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 MFGE8Q08431 387 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 C17orf67Q0P5P2 114 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 KCTD18Q6PI47 426 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 TMEM65Q6PI78 240 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 KRT77Q7Z794 578 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ZNF454Q8N9F8 522 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 OR2T35Q8NGX2 323 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 RELTQ969Z4 430 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 RBP7Q96R05 134 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 ZNF436Q9C0F3 470 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 CDCP1Q9H5V8 836 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 PRELID1Q9Y255 219 aa16.5■□□□□ 0.23
SEMA3B-209ENST00000456560 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 TOXO94900 526 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 WNT11O96014 354 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 ZP1P60852 638 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 PUDPQ08623 228 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 SQSTM1Q13501 440 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 EIF2B1Q14232 305 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 NKAIN1Q4KMZ8 207 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 ANKRD16Q6P6B7 361 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 HDDC2Q7Z4H3 204 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 CATSPERDQ86XM0 798 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 NUBPLQ8TB37 319 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 RNF138Q8WVD3 245 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC7A5P2Q9GIP4 190 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 SUSD2Q9UGT4 822 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 COA3Q9Y2R0 106 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 SRSF10O75494 262 aaKnown RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 TIAF1O95411 115 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 PDGFBP01127 241 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 HEXBP07686 556 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 CCKBRP32239 447 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 DCTDP32321 178 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 SUMO3P55854 103 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 FAM166AQ6J272 317 aa16.49■□□□□ 0.23
SEMA3B-209ENST00000456560 MDGA2Q7Z553 956 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms