RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 PHYHD1Q5SRE7 291 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 FAM27BQ5VT28 67 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 LEG1Q6P5S2 330 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 TMEM108Q6UXF1 575 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 LINGO2Q7L985 606 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 LSRQ86X29 649 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 GLB1L2Q8IW92 636 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SLC22A24Q8N4F4 322 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SYT14Q8NB59 555 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 IL17RDQ8NFM7 739 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 RASD2Q96D21 266 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 PLEKHA8Q96JA3 519 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 RADILQ96JH8 1075 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 PLA2G12AQ9BZM1 189 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SYT4Q9H2B2 425 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 VCXQ9H320 206 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 NELFAQ9H3P2 528 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 FN3KQ9H479 309 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 CRNNQ9UBG3 495 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-205ENST00000453441 IL20RAQ9UHF4 553 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 KCNG2Q9UJ96 466 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 SLC25A15Q9Y619 301 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 ABCA4P78363 2273 aa7.62□□□□□ -1.19
COL28A1-205ENST00000453441 A6NNC1 897 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 C12orf71A8MTZ7 269 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 EI24O14681 340 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 SLC16A7O60669 478 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 RAB36O95755 333 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 PTHP01270 115 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 HRGP04196 525 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 THBDP07204 575 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 CST2P09228 141 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 B4GALT1P15291 398 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 CBR1P16152 277 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 MSR1P21757 451 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 PTAFRP25105 342 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 LAP3P28838 519 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 CDKN2AP42771 156 aaKnown RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 FOXG1P55316 489 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 LSM6P62312 80 aaKnown RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 NPRL3Q12980 569 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 PTGES3Q15185 160 aaKnown RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 KCNMB1Q16558 191 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 GSG1Q2KHT4 349 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 C9orf135Q5VTT2 229 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 SLX4IPQ5VYV7 408 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 TMEM53Q6P2H8 277 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 SEZ6L2Q6UXD5 910 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 ZBTB49Q6ZSB9 765 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 PTCHD4Q6ZW05 846 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 SLC16A14Q7RTX9 510 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 ZBTB46Q86UZ6 589 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 WDFY1Q8IWB7 410 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 CBR4Q8N4T8 237 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 WDR31Q8NA23 367 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 SLC37A3Q8NCC5 494 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 NPEPL1Q8NDH3 523 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 OR52E2Q8NGJ4 325 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 OR4Q3Q8NH05 313 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 OR4K13Q8NH42 304 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 LINC01560Q8TB33 94 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 NMNAT3Q96T66 252 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 CIB1Q99828 191 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 TMEFF2Q9UIK5 374 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 EDARQ9UNE0 448 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 MOKQ9UQ07 419 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 UGT2A1Q9Y4X1 527 aa7.61□□□□□ -1.19
COL28A1-205ENST00000453441 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
COL28A1-205ENST00000453441 UNC79Q9P2D8 2635 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 IGLV1-36A0A0B4J1U3 117 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 A0A1W2PPL8 197 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 FAM221AA4D161 298 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 OR6C68A6NDL8 312 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 ZAR1LA6NP61 321 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 ANKRD65E5RJM6 399 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 CASQ2O14958 399 aaPredicted RBP7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SURF4O15260 269 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 PRODHO43272 600 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SLC2A10O95528 541 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 IGKV3-15P01624 115 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 IGLV1-44P01699 117 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 CTLA4P16410 223 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 PLP2Q04941 152 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SLC34A1Q06495 639 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 FMODQ06828 376 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SCRN3Q0VDG4 424 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 RIPK1Q13546 671 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 CRMP1Q14194 572 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 TRIP10Q15642 601 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 TSC22D1Q15714 1073 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 HIKESHIQ53FT3 197 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SLC35F1Q5T1Q4 408 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SDR9C7Q8NEX9 313 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 OR52N5Q8NH56 324 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 TRUB1Q8WWH5 349 aaKnown RBP7.6□□□□□ -1.19
COL28A1-205ENST00000453441 IPCEF1Q8WWN9 437 aaPredicted RBP7.6□□□□□ -1.19
COL28A1-205ENST00000453441 NSMAFQ92636 917 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 NABP1Q96AH0 204 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 ZC3HAV1LQ96H79 300 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms