RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SPOCK1Q08629 439 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 COX10Q12887 443 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 C1DQ13901 141 aaKnown RBP11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 SNCBQ16143 134 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC35F1Q5T1Q4 408 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 TSPO2Q5TGU0 170 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 B3GLCTQ6Y288 498 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 CREB3L2Q70SY1 520 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 PHC2Q8IXK0 858 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 PARP8Q8N3A8 854 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF525Q8N782 197 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 CLDN22Q8N7P3 220 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 TEX47Q8TBZ9 253 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 RASD2Q96D21 266 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 Q96M85 177 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF570Q96NI8 536 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 TSPAN32Q96QS1 320 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 GABARAPL3Q9BY60 117 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 IL20Q9NYY1 176 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF346Q9UL40 294 aaKnown RBP11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 H7C1C5 153 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 BHLHE40O14503 412 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 VAMP5O95183 116 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 CD14P08571 375 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF43P17038 809 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 GZMKP49863 264 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 BIDP55957 195 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 LCN6P62502 163 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 GINS1Q14691 196 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 SWI5Q1ZZU3 235 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 C9orf135Q5VTT2 229 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 CARD17Q5XLA6 110 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 IZUMO2Q6UXV1 221 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC35D2Q76EJ3 337 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 FAM122BQ7Z309 247 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 PXKQ7Z7A4 578 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 ASB10Q8WXI3 467 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 DNAJC9Q8WXX5 260 aa11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 ERMAPQ96PL5 475 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-213ENST00000448520 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 LOC102725191A0A1B0GVB3 256 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 NDUFS8O00217 210 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 LMX1BO60663 402 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC2A10O95528 541 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 SELENOPP49908 381 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 PDLIM4P50479 330 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 RAD23AP54725 363 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 CDK5Q00535 292 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 NPRL3Q12980 569 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 ANKDD1AQ495B1 522 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 MESTQ5EB52 335 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 ARMC4Q5T2S8 1044 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 NANOS1Q8WY41 292 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 HTRA1Q92743 480 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 HDAC2Q92769 488 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 KCNS3Q9BQ31 491 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 FN3KQ9H479 309 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 FBXO9Q9UK97 447 aaPredicted RBP11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 ORC6Q9Y5N6 252 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 NOX1Q9Y5S8 564 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 CUBNO60494 3623 aa11.94□□□□□ -0.5
PDLIM2-213ENST00000448520 A0A1W2PRG6 482 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC35F4A4IF30 521 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 VSTM5A8MXK1 200 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 KRT33AO76009 404 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 CLIC3O95833 236 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 BCL10O95999 233 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 IGHMP01871 453 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 IGHV4-31P0DP07 118 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 VHLP40337 213 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 GIPRP48546 466 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 ESRRGP62508 458 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 CAMK2DQ13557 499 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 KRR1Q13601 381 aaKnown RBP11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 C3orf36Q3SXR2 165 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 PHYHD1Q5SRE7 291 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 RPL13AP3Q6NVV1 102 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 NIPAL3Q6P499 406 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms