RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TMEM38BQ9NVV0 291 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 IL20Q9NYY1 176 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF224Q9NZL3 707 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 GRHPRQ9UBQ7 328 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 ST6GALNAC2Q9UJ37 374 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 NDRG4Q9ULP0 352 aaKnown RBP12.32□□□□□ -0.44
SREBF1-207ENST00000447641 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
SREBF1-207ENST00000447641 IGKV1D-43A0A0B4J1Z2 117 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 IMPA2O14732 288 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 IDH3BO43837 385 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 PLAUP00749 431 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 TP53P04637 393 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-207ENST00000447641 HMGN1P05114 100 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 CBR1P16152 277 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 CD40P25942 277 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF83P51522 516 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 MYBPC1Q00872 1141 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 IL5RAQ01344 420 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 KCTD21Q4G0X4 260 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 MESTQ5EB52 335 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 ALKBH2Q6NS38 261 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 FOXL2NBQ6ZUU3 175 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 FANK1Q8TC84 345 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 SAMD8Q96LT4 415 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF75AQ96N20 296 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 RBP7Q96R05 134 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 NIPSNAP1Q9BPW8 284 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 C1QTNF6Q9BXI9 259 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 MOV10Q9HCE1 1003 aaKnown RBP12.31□□□□□ -0.44
SREBF1-207ENST00000447641 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 BATF3Q9NR55 127 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 SCN3BQ9NY72 215 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 IER3IP1Q9Y5U9 82 aa12.31□□□□□ -0.44
SREBF1-207ENST00000447641 PLCE1Q9P212 2302 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SLC22A23A1A5C7 686 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SHISA9B4DS77 424 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 ARHGEF9O43307 516 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SEC14L2O76054 403 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SLC2A10O95528 541 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 IGKV3-15P01624 115 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 CD3EP07766 207 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 OR8G3PP0DMU2 310 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 NR2C1P13056 603 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 B4GALT1P15291 398 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 PTAFRP25105 342 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 HOXC12P31275 282 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SLC6A6P31641 620 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 GGT2P36268 569 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 CXCR4P61073 352 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 UBE2NP61088 152 aaKnown RBP12.3□□□□□ -0.44
SREBF1-207ENST00000447641 MRPS34P82930 218 aaKnown RBP12.3□□□□□ -0.44
SREBF1-207ENST00000447641 FMODQ06828 376 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SLC27A4Q6P1M0 643 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 TMEM108Q6UXF1 575 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF704Q6ZNC4 412 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-207ENST00000447641 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SKA3Q8IX90 412 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SLC22A24Q8N4F4 322 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 RASD2Q96D21 266 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 SMR3AQ99954 134 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 CCNB1IP1Q9NPC3 277 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-207ENST00000447641 REV1Q9UBZ9 1251 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 RNF115Q9Y4L5 304 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 CDH10Q9Y6N8 788 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 ZANQ9Y493 2812 aa12.3□□□□□ -0.44
SREBF1-207ENST00000447641 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
SREBF1-207ENST00000447641 DSCAMO60469 2012 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 TEX13CA0A0J9YWL9 993 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 BHLHE40O14503 412 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 MRPS14O60783 128 aaKnown RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 MITFO75030 526 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 PPP1R3DO95685 299 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 LYNP07948 512 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 POU1F1P28069 291 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 CDKN2AP42771 156 aaKnown RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF84P51523 738 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 TUBA1BP68363 451 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 TUBA4AP68366 448 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ADAM8P78325 824 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 CD47Q08722 323 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 KRR1Q13601 381 aaKnown RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF362Q5T0B9 420 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 UGT2A3Q6UWM9 527 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 PTCHD4Q6ZW05 846 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 TUBA1AQ71U36 451 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF786Q8N393 782 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 OR8D4Q8NGM9 314 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms