RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KLHDC3Q9BQ90 382 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 EDEM2Q9BV94 578 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 NXF5Q9H1B4 397 aaKnown RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 CACNA1CQ13936 2221 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 TMEM131Q92545 1883 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 A0A0A6YYH2 397 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 A0A1B0GTI1 187 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 A0A1W2PPC1 479 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 PRSS37A4D1T9 235 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 A6NJ64 397 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 C17orf105B2RV13 164 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 EIF4E2O60573 245 aaKnown RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 HTR2CP28335 458 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 LPCAT3Q6P1A2 487 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 SLC35D2Q76EJ3 337 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF546Q86UE3 836 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 PXT1Q8NFP0 134 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ST8SIA2Q92186 375 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 C8orf44Q96CB5 159 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 MMABQ96EY8 250 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 TCTN2Q96GX1 697 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 PBX4Q9BYU1 374 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ZC4H2Q9NQZ6 224 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 CKLFQ9UBR5 152 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ALPK2Q86TB3 2170 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 TRAV36DV7A0A075B6V5 113 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 CD74P04233 296 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 CD2P06729 351 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF345Q14585 488 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF542PQ5EBM4 170 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 OR5M8Q8NGP6 311 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF519Q8TB69 540 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 PTPMT1Q8WUK0 201 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-204ENST00000447182 SLC46A1Q96NT5 459 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 GAS2L1Q99501 681 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-204ENST00000447182 PRMT8Q9NR22 394 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-204ENST00000447182 RASL12Q9NYN1 266 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 CYB5R1Q9UHQ9 305 aa17.19■□□□□ 0.34
SDCBP-204ENST00000447182 ATP6V1G2-DDX39BF2Z307 99 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 HLA-DQA2P01906 255 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF735P0CB33 412 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 CXCR1P25024 350 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 HTRA3P83110 453 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 KCTD18Q6PI47 426 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 NDUFAF7Q7L592 441 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 CATSPERDQ86XM0 798 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 BEST3Q8N1M1 668 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 KCNRGQ8N5I3 272 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 STEAP2Q8NFT2 490 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 METTL21AQ8WXB1 218 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF587Q96SQ5 575 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 MRPL22Q9NWU5 206 aaKnown RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 VSX1Q9NZR4 365 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 MRTO4Q9UKD2 239 aaKnown RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 TMEM184BQ9Y519 407 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 IGLV1-36A0A0B4J1U3 117 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 FRG2CA6NGY1 282 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 PRAMEF26H0Y7S4 382 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 LDLRAD4O15165 306 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 MT-ATP6P00846 226 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 FCER2P06734 321 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 CD96P40200 585 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 RPL27P61353 136 aaKnown RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF117Q03924 483 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 SGCBQ16585 318 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 GLYATL3Q5SZD4 288 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 ATPAF1Q5TC12 328 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 FAM109BQ6ICB4 259 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 MAMDC2Q7Z304 686 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 PARGQ86W56 976 aa17.18■□□□□ 0.34
SDCBP-204ENST00000447182 TINAGL1Q9GZM7 467 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 GPN3Q9UHW5 284 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-204ENST00000447182 SPTY2D1-AS1A0A0U1RR47 76 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 TEX46H3BTG2 121 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 CYB5AP00167 134 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 AMY2AP04746 511 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 SLC25A4P12235 298 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 RIDAP52758 137 aaKnown RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MRPS21P82921 87 aaKnown RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 TMEM92Q6UXU6 159 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 CFAP77Q6ZQR2 320 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF627Q7L945 461 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ADGRE4PQ86SQ3 457 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 IQCF2Q8IXL9 164 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 FAM160A2Q8N612 972 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF321PQ8N8H1 164 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 PPP1R14AQ96A00 147 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 SLC38A3Q99624 504 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MEGF11A6BM72 1044 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 OR5H14A6NHG9 310 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 C11orf98E9PRG8 122 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 OR2F2O95006 317 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 SEMA4FO95754 770 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 RORAP35398 523 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 PBX2P40425 430 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 GABRA4P48169 554 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms