RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TMEM200A	Q86VY9	491 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	PDZD9	Q8IXQ8	264 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	OR6V1	Q8N148	313 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	OR1J2	Q8NGS2	313 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	GTF3A	Q92664	365 aa	Known RBP	11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	SERINC2	Q96SA4	455 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	ASF1B	Q9NVP2	202 aa		11.37	□□□□□ -0.59
DDR1-238	ENST00000446312	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.37	□□□□□ -0.59
DDR1-238	ENST00000446312		A0A1B0GV50	99 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	KLF8	O95600	359 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	ITGA5	P08648	1049 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	MYF5	P13349	255 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	PBX2	P40425	430 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	OR1D4	P47884	311 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	BIK	Q13323	160 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	TSSK4	Q6SA08	328 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	CHRDL2	Q6WN34	429 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	ABHD13	Q7L211	337 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	DND1	Q8IYX4	353 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	MESP1	Q9BRJ9	268 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	OR11A1	Q9GZK7	315 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	MED11	Q9P086	117 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	GRHPR	Q9UBQ7	328 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	PILRA	Q9UKJ1	303 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	DBX1	A6NMT0	343 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	RHPN2P1	A8MT19	583 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	HCRTR2	O43614	444 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	APOD	P05090	189 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	PRF1	P14222	555 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	HOXB2	P14652	356 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	PSMD4	P55036	377 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	UBXN2B	Q14CS0	331 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	C2orf76	Q3KRA6	126 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	MOGAT2	Q3SYC2	334 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	EXOSC6	Q5RKV6	272 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	BEST3	Q8N1M1	668 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	OR2AK2	Q8NG84	335 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	POM121	Q96HA1	1249 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	JAM3	Q9BX67	310 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	B9D1	Q9UPM9	204 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	ZNF337	Q9Y3M9	751 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	ENTPD2	Q9Y5L3	495 aa		11.36	□□□□□ -0.59
DDR1-238	ENST00000446312	LOC101059948	A0A1B0GTJ6	334 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	GPR31	O00270	319 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SDC3	O75056	442 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	IFNGR1	P15260	489 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	PTBP1	P26599	531 aa	Known RBP eCLIP	11.35	□□□□□ -0.59	4e-6	■■■■■ 35.7
DDR1-238	ENST00000446312	GLYATL3	Q5SZD4	288 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	CAMKV	Q8NCB2	501 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	C16orf52	Q8NHV5	167 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ROBO4	Q8WZ75	1007 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	HDAC8	Q9BY41	377 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	RTN4R	Q9BZR6	473 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	OPN4	Q9UHM6	478 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312		A0A1B0GWJ7	208 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	LINC01553	A4QN01	128 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	TMEM200C	A6NKL6	621 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312		A8MXK9	166 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	OGG1	O15527	345 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	LINC01565	O15544	149 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	CLN5	O75503	358 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SLC2A1	P11166	492 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	RORA	P35398	523 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	GNAL	P38405	381 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ACTA2	P62736	377 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ACTG2	P63267	376 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	IKZF1	Q13422	519 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	GK2	Q14410	553 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	TMEM196	Q5HYL7	178 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	NHLRC3	Q5JS37	347 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ACER2	Q5QJU3	275 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	AVPI1	Q5T686	147 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	C3orf33	Q6P1S2	294 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	LRRTM1	Q86UE6	522 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SPAG16	Q8N0X2	631 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	HGD	Q93099	445 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	S100PBP	Q96BU1	408 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	KIR3DX1	Q9H7L2	352 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SOHLH2	Q9NX45	425 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	EML5	Q05BV3	1969 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	MED19	A0JLT2	244 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SHISA8	B8ZZ34	492 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ACOT7	O00154	380 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	SLC16A7	O60669	478 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	CRYBA1	P05813	215 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	MAP3K8	P41279	467 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ARRB1	P49407	418 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	EPHA4	P54764	986 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	AP3S2	P59780	193 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	BDH1	Q02338	343 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	ULK3	Q6PHR2	472 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	MED25	Q71SY5	747 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	GALNTL5	Q7Z4T8	443 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	COMMD2	Q86X83	199 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	FAM160A2	Q8N612	972 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	STEAP2	Q8NFT2	490 aa		11.35	□□□□□ -0.59
DDR1-238	ENST00000446312	NUDCD2	Q8WVJ2	157 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms