RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF229Q9UJW7 825 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 UBQLN1Q9UMX0 589 aaKnown RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 STYXL1Q9Y6J8 313 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 V9GY05 133 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 MYO3AQ8NEV4 1616 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 FANCIQ9NVI1 1328 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 FAM135AQ9P2D6 1515 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 KDM5CP41229 1560 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 STRCP1A6NGW2 1772 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 NHSL1Q5SYE7 1610 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 RAPGEF6Q8TEU7 1601 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 GOLGA8QA0A0J9YX86 632 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 GPAA1O43292 621 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC19A2O60779 497 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 CLDN11O75508 207 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 KBTBD11O94819 623 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 VENTXO95231 258 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC35E2P0CK97 266 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR1E1P30953 314 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 CSKP41240 450 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATP6V0D1P61421 351 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 IRX3P78415 501 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 BCL2L1Q07817 233 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ECH1Q13011 328 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 TRMT5Q32P41 509 aaKnown RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 OLFML2AQ68BL7 652 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SPINK14Q6IE38 97 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 C11orf71Q6IPW1 123 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 WDR74Q6RFH5 385 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF600Q6ZNG1 722 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC35D2Q76EJ3 337 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF571Q7Z3V5 609 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC25A42Q86VD7 318 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 CDC20BQ86Y33 519 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF547Q8IVP9 402 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 FAM9CQ8IZT9 166 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 LYG1Q8N1E2 194 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 NUBPLQ8TB37 319 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 AGAP11Q8TF27 550 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 TRNT1Q96Q11 434 aaKnown RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 RARRES2Q99969 163 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 PELOQ9BRX2 385 aaKnown RBP3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 DEFB129Q9H1M3 183 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SIAEQ9HAT2 523 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACP6Q9NPH0 428 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIF25Q9UIL4 384 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 GOLT1BQ9Y3E0 138 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 LRRC9Q6ZRR7 1453 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ROBO1Q9Y6N7 1651 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 ADGRA3Q8IWK6 1321 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SYNMO15061 1565 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 MSH6P52701 1360 aa3.38□□□□□ -1.87
HMGB1P48-201ENST00000446155 SCAF11Q99590 1463 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 IGHV1OR15-1A0A075B7D0 117 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 A0A1B0GW55 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RBMY1BA6NDE4 496 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RBMY1EA6NEQ0 496 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC22A20A6NK97 555 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 ERI2A8K979 691 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 H7C0C1 242 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 K7N7A8 449 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 PLPP1O14494 284 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RFXANKO14593 260 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC9A3R1O14745 358 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 BCL2L11O43521 198 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 XRCC2O43543 280 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 HCRTR1O43613 425 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 GALR3O60755 368 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF253O75346 499 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 ENTPD5O75356 428 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SRSF10O75494 262 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 EIF3GO75821 320 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SMC2O95347 1197 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 HBE1P02100 147 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KLK1P06870 262 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RBMY1DP0C7P1 496 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L2P0CJ85 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L3P0CJ86 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L4P0CJ87 422 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L5P0CJ88 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L6P0CJ89 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L7P0CJ90 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RBMY1A1P0DJD3 496 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 CXCR2P25025 360 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 AQP1P29972 269 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 NTSP30990 170 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 HTR2BP41595 481 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR2DS4P43632 304 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KCNJ3P48549 501 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KLK7P49862 253 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 TPM4P67936 248 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SIGLEC14Q08ET2 396 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 TGIF1Q15583 401 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 PSMD5Q16401 504 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 QRICH1Q2TAL8 776 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms