RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 KLHL24Q6TFL4 600 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 THAP5Q7Z6K1 395 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 OR10H5Q8NGA6 315 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 OR6K6Q8NGW6 343 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 C11orf40Q8WZ69 217 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 NABP1Q96AH0 204 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 S100PBPQ96BU1 408 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 ACTR6Q9GZN1 396 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 Q9H521 79 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 SLC17A5Q9NRA2 495 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 DNAJC27Q9NZQ0 273 aa13.83□□□□□ -0.2
USP40-206ENST00000443711 TVP23AA6NH52 213 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 OR5H1A6NKK0 313 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 ENTPD6O75354 484 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 MPZL1O95297 269 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 GPANK1O95872 356 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 TFP02787 698 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 SCG5P05408 212 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 RNF224P0DH78 156 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 GAAP10253 952 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 ZNF823P16415 610 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 GSTT1P30711 240 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 CDH11P55287 796 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 LSM6P62312 80 aaKnown RBP13.82□□□□□ -0.2
USP40-206ENST00000443711 TMED1Q13445 227 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 TIMM23BQ5SRD1 257 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 SLC16A14Q7RTX9 510 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 DPPA2Q7Z7J5 298 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 NANOS1Q8WY41 292 aaKnown RBP13.82□□□□□ -0.2
USP40-206ENST00000443711 HSD17B8Q92506 261 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 HTRA1Q92743 480 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 MUCL1Q96DR8 90 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 ZMYND19Q96E35 227 aaPredicted RBP13.82□□□□□ -0.2
USP40-206ENST00000443711 SH3GL3Q99963 347 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 WACQ9BTA9 647 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 ANKRD60Q9BZ19 345 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 EMC7Q9NPA0 242 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 AASSQ9UDR5 926 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 WARS2Q9UGM6 360 aaKnown RBP13.82□□□□□ -0.2
USP40-206ENST00000443711 NDRG3Q9UGV2 375 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.2
USP40-206ENST00000443711 AMDHD2Q9Y303 409 aa13.82□□□□□ -0.2
USP40-206ENST00000443711 KLF2Q9Y5W3 355 aaPredicted RBP13.82□□□□□ -0.2
USP40-206ENST00000443711 ARPC4-TTLL3A0A0A6YYG9 625 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 CCDC182A6NF36 153 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 C12orf71A8MTZ7 269 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 WNT11O96014 354 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 CST2P09228 141 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 MYF6P23409 242 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
USP40-206ENST00000443711 HTR1FP30939 366 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 CCKARP32238 428 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 PEX19P40855 299 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 UGT2A3Q6UWM9 527 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 SSX8Q7RTT4 187 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.81□□□□□ -0.2
USP40-206ENST00000443711 LRRC18Q8N456 261 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 WDR31Q8NA23 367 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 ZNF416Q9BWM5 594 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 CDADC1Q9BWV3 514 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 MARCH7Q9H992 704 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
USP40-206ENST00000443711 MRPL22Q9NWU5 206 aaKnown RBP13.81□□□□□ -0.2
USP40-206ENST00000443711 HAO2Q9NYQ3 351 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 KCNG2Q9UJ96 466 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 POLR1DQ9Y2S0 133 aa13.81□□□□□ -0.2
USP40-206ENST00000443711 HELZ2Q9BYK8 2649 aaKnown RBP13.81□□□□□ -0.2
USP40-206ENST00000443711 SH3D21A4FU49 640 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 TMCC2O75069 709 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
USP40-206ENST00000443711 UBL3O95164 117 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 PAX7P23759 505 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 CAPZA2P47755 286 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 ENTPD1P49961 510 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 PCBD1P61457 104 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 ADAM8P78325 824 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 CDK5R2Q13319 367 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 ENDOGQ14249 297 aaKnown RBP13.8□□□□□ -0.2
USP40-206ENST00000443711 MEP1BQ16820 701 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 SLC36A2Q495M3 483 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 LYPD4Q6UWN0 246 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 B3GLCTQ6Y288 498 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 SYT9Q86SS6 491 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
USP40-206ENST00000443711 OR52N5Q8NH56 324 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 CNIH3Q8TBE1 160 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 FBLIM1Q8WUP2 373 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 APH1BQ8WW43 257 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 INTS14Q96SY0 518 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 RNF121Q9H920 327 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 CCNB1IP1Q9NPC3 277 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 COMMD3-BMI1R4GMX3 469 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 BAHCC1Q9P281 2608 aa13.8□□□□□ -0.2
USP40-206ENST00000443711 FASNP49327 2511 aaKnown RBP13.79□□□□□ -0.2
USP40-206ENST00000443711 ZNF593O00488 134 aaPredicted RBP13.79□□□□□ -0.2
USP40-206ENST00000443711 DENRO43583 198 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms