RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PSG11Q9UQ72 335 aa3.43□□□□□ -1.86
CDC42BPA-207ENST00000441725 ARL2BPQ9Y2Y0 163 aa3.43□□□□□ -1.86
CDC42BPA-207ENST00000441725 EXOSC1Q9Y3B2 195 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-207ENST00000441725 SYNMO15061 1565 aa3.43□□□□□ -1.86
CDC42BPA-207ENST00000441725 PLEKHG1Q9ULL1 1385 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SMCO3A2RU48 225 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 A6NIZ1 184 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 METTL15A6NJ78 407 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 M0QZK8 103 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 INPP4BO15327 924 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 UGT1A9O60656 530 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SRP72O76094 671 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RCBTB2O95199 551 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 LDOC1O95751 146 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SERPINA1P01009 418 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PPBPP02775 128 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PCCAP05165 728 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CD1EP15812 388 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 MMP11P24347 488 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 STOMP27105 288 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 DCKP27707 260 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 OTX1P32242 354 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RCVRNP35243 200 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PLP1P60201 277 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CCL7P80098 99 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 VLDLRP98155 873 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ARL16Q0P5N6 197 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 TMEM187Q14656 261 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 TEAD2Q15562 447 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 EMBQ6PCB8 327 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 C19orf48Q6RUI8 117 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 HPS6Q86YV9 775 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CRLF3Q8IUI8 442 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 NRMQ8IXM6 262 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RIBC1Q8N443 379 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CDRT4Q8N9R6 151 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 OR2AP1Q8NGE2 309 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CNIH3Q8TBE1 160 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZNF524Q96C55 264 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 NTNG2Q96CW9 530 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 C10orf35Q96D05 121 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CNRIP1Q96F85 164 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SLC38A2Q96QD8 506 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RNF2Q99496 336 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 YTHDF1Q9BYJ9 559 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ULBP2Q9BZM5 246 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 NT5DC2Q9H857 520 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 UGT1A7Q9HAW7 530 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 UGT1A8Q9HAW9 530 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 DDX19AQ9NUU7 478 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SDHAF2Q9NX18 166 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 IFNKQ9P0W0 207 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 MGAT4AQ9UM21 535 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 L3MBTL1Q9Y468 752 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 POLR3HQ9Y535 204 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 NWD1Q149M9 1564 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 UTRNP46939 3433 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PPIAL4EA0A075B759 164 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 KCNE1BA0A087WTH5 132 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 IGHV3-20A0A0C4DH32 117 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 OR7A17O14581 309 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 GOSR2O14653 212 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 TPST2O60704 377 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 HUS1O60921 280 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZMPSTE24O75844 475 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CEACAM4O75871 244 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CTDNEP1O95476 244 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CD5P06127 495 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 FBP1P09467 338 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZDHHC11BP0C7U3 371 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PPIAL4FP0DN26 164 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PGCP20142 388 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PMCHP20382 165 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CD82P27701 267 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 NANOS3P60323 173 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 UBE2KP61086 200 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SELENBP1Q13228 472 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 DPYSL3Q14195 570 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 KLHL12Q53G59 568 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 FFAR4Q5NUL3 377 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PRR5LQ6MZQ0 368 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 FAHD2BQ6P2I3 314 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 TSEN54Q7Z6J9 526 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 THOC6Q86W42 341 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CALHM1Q8IU99 346 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 SYS1Q8N2H4 156 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RAB42Q8N4Z0 105 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CLDN19Q8N6F1 224 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CATSPER1Q8NEC5 780 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 CCDC54Q8NEL0 328 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 PCNPQ8WW12 178 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 FAHD2AQ96GK7 314 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 RNF170Q96K19 258 aa3.42□□□□□ -1.86
CDC42BPA-207ENST00000441725 ALKBH3Q96Q83 286 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms