RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NSG1P42857 185 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 ACLYP53396 1101 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 HMGN5P82970 282 aaKnown RBP2.81□□□□□ -1.96
PFDN4-202ENST00000441080 PTPN20Q4JDL3 420 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 Q6ZSR3 168 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 TAS2R42Q7RTR8 314 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 RIMKLAQ8IXN7 391 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 NOXO1Q8NFA2 376 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF502Q8TBZ5 544 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 ABHD3Q8WU67 409 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 FGF20Q9NP95 211 aaPredicted RBP2.81□□□□□ -1.96
PFDN4-202ENST00000441080 ZNRD1Q9P1U0 126 aa2.81□□□□□ -1.96
PFDN4-202ENST00000441080 GLYATL1P3A0A0U1RQE8 302 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF705GA8MUZ8 300 aaPredicted RBP2.8□□□□□ -1.96
PFDN4-202ENST00000441080 PALMO75781 387 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 VAMP5O95183 116 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF138P52744 262 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 ESRRGP62508 458 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 SYCNQ0VAF6 134 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 MOBPQ13875 183 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 RGNQ15493 299 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 THEM4Q5T1C6 240 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 FBXW9Q5XUX1 488 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 DNAJC24Q6P3W2 148 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 CEMP1Q6PRD7 247 aaPredicted RBP2.8□□□□□ -1.96
PFDN4-202ENST00000441080 ARL9Q6T311 187 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 SASS6Q6UVJ0 657 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 PRSS58Q8IYP2 241 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 CNDP1Q96KN2 507 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 CENPKQ9BS16 269 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 RSPO3Q9BXY4 272 aaPredicted RBP2.8□□□□□ -1.96
PFDN4-202ENST00000441080 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 SYNDIG1Q9H7V2 258 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 C12orf10Q9HB07 376 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 HMG20AQ9NP66 347 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 SIRT7Q9NRC8 400 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 SAMSN1Q9NSI8 373 aaKnown RBP2.8□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF355PQ9NSJ1 428 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 TMED5Q9Y3A6 229 aa2.8□□□□□ -1.96
PFDN4-202ENST00000441080 TET2Q6N021 2002 aaPredicted RBP2.8□□□□□ -1.96
PFDN4-202ENST00000441080 HEATR9A2RTY3 570 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 RAB29O14966 203 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 RP2O75695 350 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 TSPAN13O95857 204 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ADRA2AP08913 450 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 CCNB1P14635 433 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF250P15622 560 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF24P17028 368 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 RAB3BP20337 219 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 NPY1RP25929 384 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 FOXN2P32314 431 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 NAA10P41227 235 aaPredicted RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 TNNT2P45379 298 aaPredicted RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 TMED10P49755 219 aaKnown RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ADARB1P78563 741 aaKnown RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 SLC25A11Q02978 314 aaKnown RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 MXD1Q05195 221 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 SHHQ15465 462 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 Q5W150 140 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 MMAAQ8IVH4 418 aaKnown RBP2.79□□□□□ -1.96
PFDN4-202ENST00000441080 UBALD2Q8IYN6 164 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 FBXL13Q8NEE6 735 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 OR56B2PQ8NGI1 322 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 OR10J6PQ8NGY7 276 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 OR5B3Q8NH48 314 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 KIFAP3Q92845 792 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF681Q96N22 645 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 SLC29A1Q99808 456 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 FAM49BQ9NUQ9 324 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 CTSFQ9UBX1 484 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ST3GAL6Q9Y274 331 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF835Q9Y2P0 537 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 TMEM14AQ9Y6G1 99 aa2.79□□□□□ -1.96
PFDN4-202ENST00000441080 USP47Q96K76 1375 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 MAPK8IP3Q9UPT6 1336 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 XKRY2A2RUG3 117 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 FAM47DPA6NHR8 397 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 LRRIQ3A6PVS8 624 aaPredicted RBP2.78□□□□□ -1.96
PFDN4-202ENST00000441080 AIM2O14862 343 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 RAD51BO15315 384 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 CIB2O75838 187 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 ANXA5P08758 320 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF286BP0CG31 522 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 MUC1P15941 1255 aaPredicted RBP2.78□□□□□ -1.96
PFDN4-202ENST00000441080 F2RP25116 425 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 FAM78AQ5JUQ0 283 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 OR5B12Q96R08 314 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 ZNF382Q96SR6 550 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 SAV1Q9H4B6 383 aaPredicted RBP2.78□□□□□ -1.96
PFDN4-202ENST00000441080 GPATCH2LQ9NWQ4 482 aa2.78□□□□□ -1.96
PFDN4-202ENST00000441080 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
PFDN4-202ENST00000441080 TMEM223A0PJW6 202 aa2.77□□□□□ -1.97
PFDN4-202ENST00000441080 RBFOX2O43251 390 aaKnown RBP eCLIP2.77□□□□□ -1.97
PFDN4-202ENST00000441080 SERPINA5P05154 406 aa2.77□□□□□ -1.97
PFDN4-202ENST00000441080 UBTFL6P0CB48 400 aaPredicted RBP2.77□□□□□ -1.97
PFDN4-202ENST00000441080 OR5H8P0DN80 308 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms