RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 GRHL3Q8TE85 626 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 OR1E3Q8WZA6 343 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 CCDC74AQ96AQ1 378 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 PIK3IP1Q96FE7 263 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 ZNF426Q9BUY5 554 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 EDEM2Q9BV94 578 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 FOXQ1Q9C009 403 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 ACKR4Q9NPB9 350 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 HEBP2Q9Y5Z4 205 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 TRAV8-7A0A075B6U6 113 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PEX12O00623 359 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ZNF432O94892 652 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 AK1P00568 194 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NFYBP25208 207 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 CFPP27918 469 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 RPS15AP62244 130 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 DCST2Q5T1A1 773 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 UNQ6126/PRO20091Q6UXV3 157 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ABHD13Q7L211 337 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PARGQ86W56 976 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 SLC30A7Q8NEW0 376 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 OR51D1Q8NGF3 324 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 OR6K6Q8NGW6 343 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NT5CQ8TCD5 201 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 COL26A1Q96A83 441 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ZBTB8AQ96BR9 441 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 Q96M85 177 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NMNAT2Q9BZQ4 307 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 TCEAL2Q9H3H9 227 aaPredicted RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 C8orf33Q9H7E9 229 aaPredicted RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 SLC17A5Q9NRA2 495 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 SLC17A4Q9Y2C5 497 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NOP16Q9Y3C1 178 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 ENTPD2Q9Y5L3 495 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PRSS38A1L453 326 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PRR19A6NJB7 356 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 UPK3AO75631 287 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 RPP14O95059 124 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 CD74P04233 296 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NGFRP08138 427 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 TPT1P13693 172 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 PEBP1P30086 187 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 CAPZA1P52907 286 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 MRPS21P82921 87 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 NAAAQ02083 359 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PJVKQ0ZLH3 352 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NR0B2Q15466 257 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ALG11Q2TAA5 492 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NKAPLQ5M9Q1 402 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 FAM220AQ7Z4H9 259 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ZNF595Q8IYB9 648 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 ZSCAN1Q8NBB4 408 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 PATE1Q8WXA2 126 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 TINAGL1Q9GZM7 467 aaPredicted RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 FLRT3Q9NZU0 649 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 FRRS1LQ9P0K9 344 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 RCC2Q9P258 522 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 DHCR7Q9UBM7 475 aaKnown RBP10.76□□□□□ -0.69
LTBR-203ENST00000441074 MIOXQ9UGB7 285 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 FBXO4Q9UKT5 387 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 MMP17Q9ULZ9 603 aa10.76□□□□□ -0.69
LTBR-203ENST00000441074 NPIPA5A0A0B4J1W7 369 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 A0A1B0GWA3 101 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 MCIDASD6RGH6 385 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 NPIPA7E9PJI5 369 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 CCSO14618 274 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 CDC40O60508 579 aaKnown RBP eCLIP10.75□□□□□ -0.69
LTBR-203ENST00000441074 ICOSLGO75144 302 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 GLCEO94923 617 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 NPIPA8P0DM63 369 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 TLX1P31314 330 aaPredicted RBP10.75□□□□□ -0.69
LTBR-203ENST00000441074 PRKXP51817 358 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 TOMM20Q15388 145 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 EIF2S3LQ2VIR3 472 aaKnown RBP10.75□□□□□ -0.69
LTBR-203ENST00000441074 ZCCHC12Q6PEW1 402 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 BIVMQ86UB2 503 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 NAA40Q86UY6 237 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 UBALD2Q8IYN6 164 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 C15orf54Q8N8G6 183 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 SERINC2Q96SA4 455 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 NMNAT3Q96T66 252 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 STACQ99469 402 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 MNTQ99583 582 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 NRIP2Q9BQI9 281 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 GPR174Q9BXC1 333 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 DUSP22Q9NRW4 184 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 FBXO34Q9NWN3 711 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 C19orf53Q9UNZ5 99 aaPredicted RBP10.75□□□□□ -0.69
LTBR-203ENST00000441074 IGHV2-70P01814 119 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 AMY2AP04746 511 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 CELA2BP08218 269 aaPredicted RBP10.75□□□□□ -0.69
LTBR-203ENST00000441074 IFI6P09912 130 aa10.75□□□□□ -0.69
LTBR-203ENST00000441074 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms