RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 C4orf45Q96LM5 186 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ADAD1Q96M93 576 aaKnown RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 OR8B4Q96RC9 309 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 RASL10BQ96S79 203 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 WACQ9BTA9 647 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 TTTY10Q9BZA0 68 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 C11orf54Q9H0W9 315 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 MRM2Q9UI43 246 aaKnown RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 KCNG2Q9UJ96 466 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ITGB1BP2Q9UKP3 347 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 SVILO95425 2214 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 KIAA1549Q9HCM3 1950 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 APCP25054 2843 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 IGHV1-45A0A0A0MS14 117 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 SLC22A23A1A5C7 686 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 LIPT2A6NK58 231 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 TMEM200CA6NKL6 621 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 CENPXA8MT69 81 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 CDRT15L2A8MXV6 281 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 H7C1C5 153 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 GPR171O14626 319 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ORC5O43913 435 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OR2J2O76002 312 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 AQP8O94778 261 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 AKR7A3O95154 331 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZFPL1O95159 310 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 CLDN1O95832 211 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 HLA-DQA2P01906 255 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 RAB40ALP0C0E4 278 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF17P17021 662 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 FSTP19883 344 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 AHCYP23526 432 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 MNDAP41218 407 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 RIDAP52758 137 aaKnown RBP8.19□□□□□ -1.1
HDAC6-209ENST00000440653 TPTEP56180 551 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 LCN6P62502 163 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 BTBD16Q32M84 506 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 TEX30Q5JUR7 227 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 FAM27D1Q5T7N8 215 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 LIPNQ5VXI9 398 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 BICRALQ6AI39 1079 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 DEGS2Q6QHC5 323 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF227Q86WZ6 799 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 UBQLNLQ8IYU4 475 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF679Q8IYX0 411 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 GHDCQ8N2G8 530 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 FADS6Q8N9I5 356 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 IL17RDQ8NFM7 739 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OR4K17Q8NGC6 315 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OR4M1Q8NGD0 313 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OR2G2Q8NGZ5 317 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OR52N5Q8NH56 324 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF671Q8TAW3 534 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 RAB40AQ8WXH6 277 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 HPS1Q92902 700 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 MR1Q95460 341 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 C5orf34Q96MH7 638 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 FRMD6Q96NE9 622 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 CMKLR1Q99788 373 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 PDCD1LG2Q9BQ51 273 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ULBP3Q9BZM4 244 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 STRADBQ9C0K7 418 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 MOB1AQ9H8S9 216 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 RNF121Q9H920 327 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 TCF7L1Q9HCS4 588 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 APMAPQ9HDC9 416 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 NOX4Q9NPH5 578 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 OCIAD1Q9NX40 245 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF221Q9UK13 617 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 PAIP2BQ9ULR5 123 aaKnown RBP8.19□□□□□ -1.1
HDAC6-209ENST00000440653 B9D1Q9UPM9 204 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 RPH3AQ9Y2J0 694 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-209ENST00000440653 HDGFL3Q9Y3E1 203 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 ABCA2Q9BZC7 2435 aa8.19□□□□□ -1.1
HDAC6-209ENST00000440653 TRBV5-7A0A0A0MS05 114 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 OR4C45A6NMZ5 311 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 IFITM5A6NNB3 132 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 DCTN6O00399 190 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 DNPH1O43598 174 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 SULT1B1O43704 296 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 GSTZ1O43708 216 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-209ENST00000440653 GMFGO60234 142 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 SLC16A7O60669 478 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 KHDRBS3O75525 346 aaKnown RBP8.18□□□□□ -1.1
HDAC6-209ENST00000440653 PLGP00747 810 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-209ENST00000440653 CD2P06729 351 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 EIF4EP06730 217 aaKnown RBP8.18□□□□□ -1.1
HDAC6-209ENST00000440653 COX6A1P12074 109 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 PRF1P14222 555 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 SPNP16150 400 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 ATF1P18846 271 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 WT1P19544 449 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-209ENST00000440653 SRMP19623 302 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 DDOSTP39656 456 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 PSMB10P40306 273 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 PTGDSP41222 190 aa8.18□□□□□ -1.1
HDAC6-209ENST00000440653 MMP15P51511 669 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms