RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HIPK1Q86Z02 1210 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF584Q8IVC4 421 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 LRRC75A-AS1Q8N1F1 130 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 NUP37Q8NFH4 326 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 OR52E2Q8NGJ4 325 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 OR8D4Q8NGM9 314 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 OR4K13Q8NH42 304 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 OR5K1Q8NHB7 308 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 TEX47Q8TBZ9 253 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 HTRA1Q92743 480 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 NMNAT3Q96T66 252 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 NUAK2Q9H093 628 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 REV1Q9UBZ9 1251 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 ITGB1BP2Q9UKP3 347 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 SPEF1Q9Y4P9 236 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 FKBP7Q9Y680 259 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 IQCMA0A1B0GVH7 501 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 VSTM5A8MXK1 200 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 H3BN98 237 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 SMPD2O60906 423 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 SOX14O95416 240 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 SOD3P08294 240 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 IGFBP1P08833 259 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF35P13682 527 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 OSMP13725 252 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF32P17041 273 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 TTKP33981 857 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 FABP6P51161 128 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ART1P52961 327 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 LSM6P62312 80 aaKnown RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 HSF2Q03933 536 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 HGFACQ04756 655 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 KPNB1Q14974 876 aaKnown RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 TESK1Q15569 626 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 KCNMB1Q16558 191 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 SLC36A3Q495N2 470 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 SLC35F1Q5T1Q4 408 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZFP1Q6P2D0 407 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZBTB46Q86UZ6 589 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 HS3ST5Q8IZT8 346 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 FBXL14Q8N1E6 418 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 MUC15Q8N387 334 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 NPEPL1Q8NDH3 523 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 OR1J2Q8NGS2 313 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 FBXO17Q96EF6 278 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 RACGAP1Q9H0H5 632 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 CA10Q9NS85 328 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF701Q9NV72 531 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 KLHL21Q9UJP4 597 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 B9D1Q9UPM9 204 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 COA3Q9Y2R0 106 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-206ENST00000439717 TIMM10BQ9Y5J6 103 aa10.24□□□□□ -0.77
HSPG2-206ENST00000439717 OTOGQ6ZRI0 2925 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 OR6C68A6NDL8 312 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 G3V2T6 193 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 OVOL3O00110 214 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SNAP29O95721 258 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 IFNGP01579 166 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 PRKACGP22612 351 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 NR4A1P22736 598 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 GRK5P34947 590 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 APLNRP35414 380 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 GALK2Q01415 458 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 GLO1Q04760 184 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SCRN3Q0VDG4 424 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 DAG1Q14118 895 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 ENDOGQ14249 297 aaKnown RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 TBC1D28Q2M2D7 210 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 PABPC1L2AQ5JQF8 200 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF362Q5T0B9 420 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 FAHD1Q6P587 224 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SPNS3Q6ZMD2 512 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 ALDH16A1Q8IZ83 802 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 OR6V1Q8N148 313 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SVOPLQ8N434 492 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SLC37A3Q8NCC5 494 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SLC30A7Q8NEW0 376 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SDR9C7Q8NEX9 313 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 OR4Q3Q8NH05 313 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 LRTOMTQ8WZ04 291 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 CENPNQ96H22 339 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 TSSK2Q96PF2 358 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 DDOQ99489 341 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF416Q9BWM5 594 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 GSX2Q9BZM3 304 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 RERGLQ9H628 205 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SRA1Q9HD15 236 aaKnown RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 RPRD1BQ9NQG5 326 aaKnown RBP10.23□□□□□ -0.77
HSPG2-206ENST00000439717 CBLN4Q9NTU7 201 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 KIF17Q9P2E2 1029 aa10.23□□□□□ -0.77
HSPG2-206ENST00000439717 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms