RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 DCCP43146 1447 aa2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZNFX1Q9P2E3 1918 aaKnown RBP2.25□□□□□ -2.05
VPS41-207ENST00000439468 ZFHX4Q86UP3 3567 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 NFASCO94856 1347 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 TRPM2O94759 1503 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 CASP8AP2Q9UKL3 1982 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 HEATR9A2RTY3 570 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 CCDC182A6NF36 153 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 TRIM49D1C9J1S8 452 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 F6UB75 175 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 LAD1O00515 517 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 DLGAP1O14490 977 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 RNF13O43567 381 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 DFNA5O60443 496 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 SS18L1O75177 396 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 ERLIN1O75477 346 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 CA11O75493 328 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 CIB2O75838 187 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 SLC25A27O95847 323 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 PRB2P02812 416 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 C2P06681 752 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 PABPC4LP0CB38 370 aaKnown RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 HPGDP15428 266 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 ACTA2P62736 377 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 ACTG2P63267 376 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 ACTC1P68032 377 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 ACTA1P68133 377 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 MECOMQ03112 1051 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 LRRC74AQ0VAA2 488 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 SSX2Q16385 188 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 SOHLH1Q5JUK2 328 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 LY6G6FQ5SQ64 297 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 TMEM107Q6UX40 140 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 MDS2Q8NDY4 140 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 B3GNT7Q8NFL0 401 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 OR51G1Q8NGK1 321 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 OR1N2Q8NGR9 330 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 MARCH1Q8TCQ1 289 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 MCOLN3Q8TDD5 553 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 BLOC1S5Q8TDH9 187 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 GEMIN6Q8WXD5 167 aaKnown RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 TMEM54Q969K7 222 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 AURKBQ96GD4 344 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 ATP5SQ99766 215 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 SH3GL1Q99961 368 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 CENPKQ9BS16 269 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 NUP58Q9BVL2 599 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 NEUROG2Q9H2A3 272 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 FGF20Q9NP95 211 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 DMAP1Q9NPF5 467 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 EXD2Q9NVH0 621 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 NMRK1Q9NWW6 199 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 PSMC3IPQ9P2W1 217 aaPredicted RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 PCYOX1Q9UHG3 505 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 LSM7Q9UK45 103 aaKnown RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 MRPS18BQ9Y676 258 aaKnown RBP2.24□□□□□ -2.05
VPS41-207ENST00000439468 KIAA1551Q9HCM1 1747 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 PXDNLA1KZ92 1463 aa2.24□□□□□ -2.05
VPS41-207ENST00000439468 UNC79Q9P2D8 2635 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 PXDNQ92626 1479 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 IGHV3-64DA0A0J9YX35 117 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 PLAC8L1A1L4L8 177 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 PRSS37A4D1T9 235 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 SMCO2A6NFE2 343 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 HIDE1A8MVS5 230 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ANKRD63C9JTQ0 380 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 SPECC1L-ADORA2AF8WAN1 911 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 PES1O00541 588 aaKnown RBP2.23□□□□□ -2.05
VPS41-207ENST00000439468 EIF3HO15372 352 aaKnown RBP eCLIP2.23□□□□□ -2.05
VPS41-207ENST00000439468 SLC31A2O15432 143 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 EIF3GO75821 320 aaKnown RBP eCLIP2.23□□□□□ -2.05
VPS41-207ENST00000439468 UTS2O95399 124 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 NDUFB10O96000 172 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 CRYGBP07316 175 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ANXA5P08758 320 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 IGHV3-43DP0DP04 118 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ZNF43P17038 809 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 TNNI1P19237 187 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 HOXA9P31269 272 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 IFNA8P32881 189 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 CXCL5P42830 114 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 CSNK1DP48730 415 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 CCR8P51685 355 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ZNF136P52737 540 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ATP5IP56385 69 aaPredicted RBP2.23□□□□□ -2.05
VPS41-207ENST00000439468 MRPS22P82650 360 aaKnown RBP2.23□□□□□ -2.05
VPS41-207ENST00000439468 PAX5Q02548 391 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ZNF92Q03936 586 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 TGM3Q08188 693 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 ZSCAN26Q16670 478 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 DNAJC24Q6P3W2 148 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 Q6P435 159 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 TIFABQ6ZNK6 161 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 MMAAQ8IVH4 418 aaKnown RBP2.23□□□□□ -2.05
VPS41-207ENST00000439468 ZFP41Q8N8Y5 198 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 OR10G9Q8NGN4 311 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 OR5B3Q8NH48 314 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 OR6X1Q8NH79 312 aa2.23□□□□□ -2.05
VPS41-207ENST00000439468 RAB3IL1Q8TBN0 382 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms