RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SHFQ7M4L6 423 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SLC16A9Q7RTY1 509 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 P2RY8Q86VZ1 359 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 LIX1LQ8IVB5 337 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SLC22A24Q8N4F4 322 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 STEAP2Q8NFT2 490 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 OR10H5Q8NGA6 315 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 OR51L1Q8NGJ5 315 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 OR1K1Q8NGR3 316 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNRF4Q8WWF5 429 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 BCL2L2Q92843 193 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZMYND19Q96E35 227 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 RNFT2Q96EX2 444 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 NR1H4Q96RI1 486 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 MYCBPQ99417 103 aaPredicted RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 JAM3Q9BX67 310 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 KCNN2Q9H2S1 579 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 SEC61A2Q9H9S3 476 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 CCNB1IP1Q9NPC3 277 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 OBP2BQ9NPH6 170 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 INPP5EQ9NRR6 644 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 FKBP14Q9NWM8 211 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 PSORS1C1Q9UIG5 152 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 TMEM14AQ9Y6G1 99 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 FAM208BQ5VWN6 2430 aa11.14□□□□□ -0.63
SCLT1-202ENST00000439369 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
SCLT1-202ENST00000439369 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 ARPC4-TTLL3A0A0A6YYG9 625 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 FAM20BO75063 409 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 OR2T7P0C7T2 308 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 CRHBPP24387 322 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 DCKP27707 260 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 ATP6V1E1P36543 226 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 ENTPD1P49961 510 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 CHN2P52757 468 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 NUDT6P53370 316 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 AQP6Q13520 282 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 GABRA6Q16445 453 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 SGCAQ16586 387 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 KCTD21Q4G0X4 260 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 UGT2A3Q6UWM9 527 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 STAC2Q6ZMT1 411 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 LUZP2Q86TE4 346 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 BPIFB6Q8NFQ5 453 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 OR2T27Q8NH04 317 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 CA5BP1Q8WTZ4 195 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
SCLT1-202ENST00000439369 C11orf40Q8WZ69 217 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 LGALS12Q96DT0 336 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 WDR76Q9H967 626 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 ADGRL4Q9HBW9 690 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-202ENST00000439369 MRPL22Q9NWU5 206 aaKnown RBP11.13□□□□□ -0.63
SCLT1-202ENST00000439369 GALNT8Q9NY28 637 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 AASSQ9UDR5 926 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
SCLT1-202ENST00000439369 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 OR5H1A6NKK0 313 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 FAM171A2A8MVW0 826 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 J3QRE1 110 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 PHYHO14832 338 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 IGHA1P01876 353 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 B4GALT1P15291 398 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 PPP3CBP16298 524 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 IL32P24001 234 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 CDAP32320 146 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 ADAM8P78325 824 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 SLC35A2P78381 396 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 ENDOGQ14249 297 aaKnown RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 CXorf67Q86X51 503 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 ERI1Q8IV48 349 aaKnown RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 ACBD7Q8N6N7 88 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 OR51G2Q8NGK0 314 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 ASB17Q8WXJ9 295 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 RNASE6Q93091 150 aaKnown RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 MRPL48Q96GC5 212 aaKnown RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 CDADC1Q9BWV3 514 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 KCNJ16Q9NPI9 418 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 CYB5R1Q9UHQ9 305 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 FBXL3Q9UKT7 428 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 DIMT1Q9UNQ2 313 aaKnown RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 AMDHD2Q9Y303 409 aa11.12□□□□□ -0.63
SCLT1-202ENST00000439369 NCOA6Q14686 2063 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-202ENST00000439369 KALRNO60229 2985 aa11.11□□□□□ -0.63
SCLT1-202ENST00000439369 ESPL1Q14674 2120 aa11.11□□□□□ -0.63
SCLT1-202ENST00000439369 TRIM64A6NGJ6 449 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms