RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 MRPL48Q96GC5 212 aaKnown RBP12.11□□□□□ -0.47
ACTN1-204ENST00000438964 AKR1E2Q96JD6 320 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 KXD1Q9BQD3 176 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 RPS10P5Q9NQ39 176 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 SNAPINO95295 136 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 CTSBP07858 339 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
ACTN1-204ENST00000438964 ILF3Q12906 894 aaKnown RBP eCLIP12.11□□□□□ -0.47
ACTN1-204ENST00000438964 ERV3-1Q14264 604 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 SLC9A3R2Q15599 337 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
ACTN1-204ENST00000438964 MARCH3Q86UD3 253 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 CSNK1A1LQ8N752 337 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 CCDC107Q8WV48 283 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 OR8D1Q8WZ84 308 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 SUSD6Q92537 303 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 DZANK1Q9NVP4 752 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 LRIT1Q9P2V4 623 aa12.11□□□□□ -0.47
ACTN1-204ENST00000438964 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 PNPP00491 289 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 THBS1P07996 1170 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF44P15621 663 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SERPINF1P36955 418 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 RAB11BQ15907 218 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SFTPA2Q8IWL1 248 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 CCL4L1Q8NHW4 92 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ARL11Q969Q4 196 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 TAS2R4Q9NYW5 299 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SERTAD3Q9UJW9 196 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 MRPS18BQ9Y676 258 aaKnown RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 OR2F2O95006 317 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 OR2F1Q13607 317 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 KLHL26Q53HC5 615 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF585AQ6P3V2 769 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 OR4C3Q8NH37 302 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 LCN9Q8WX39 176 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF764Q96H86 408 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SPACA7Q96KW9 195 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 POTEKPQ9BYX7 375 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 SMIM3Q9BZL3 60 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 MKKSQ9NPJ1 570 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-204ENST00000438964 PCDHGA1Q9Y5H4 931 aa12.1□□□□□ -0.47
ACTN1-204ENST00000438964 COLCA2A8K830 154 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 MOSPD3O75425 235 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 GLCEO94923 617 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ARG1P05089 322 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 RHOP08100 348 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 DEFB110Q30KQ9 67 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 CDCP2Q5VXM1 449 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 CAMKVQ8NCB2 501 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 OR4K17Q8NGC6 315 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 OR6S1Q8NH40 331 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 OR51F2Q8NH61 342 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF285Q96NJ3 590 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 IP6K3Q96PC2 410 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 MAP3K3Q99759 626 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 COMMD4Q9H0A8 199 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 PCOLCE2Q9UKZ9 415 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 CELSR3Q9NYQ7 3312 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 BRINP1O60477 761 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 EIF1BO60739 113 aaKnown RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ABOP16442 354 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF14P17017 642 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 EIF1P41567 113 aaKnown RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 TAS2R19P59542 299 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 MPPED2Q15777 294 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ADAM5Q6NVV9 412 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 GPR148Q8TDV2 347 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 FOXRED1Q96CU9 486 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 PIK3IP1Q96FE7 263 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 COX14Q96I36 57 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 SPACA5Q96QH8 159 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 CHMP1AQ9HD42 196 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-204ENST00000438964 TAS2R8Q9NYW2 309 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 ETV7Q9Y603 341 aa12.09□□□□□ -0.47
ACTN1-204ENST00000438964 A0A1W2PPH5 198 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 H0YIZ8 118 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 PMP2P02689 132 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 MAPK3P27361 379 aaPredicted RBP12.08□□□□□ -0.47
ACTN1-204ENST00000438964 ABCD3P28288 659 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 MAP3K8P41279 467 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms