RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 OTX1P32242 354 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 HRH1P35367 487 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 AQP2P41181 271 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 CXCL5P42830 114 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 UQCRFS1P47985 274 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 CRISP3P54108 245 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 LIPEQ05469 1076 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM183BQ1AE95 376 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 TTLL9Q3SXZ7 439 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 PIGGQ5H8A4 983 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 CCNJQ5T5M9 372 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 C1orf185Q5T7R7 199 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ANXA8L1Q5VT79 327 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 H2AFVQ71UI9 128 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 PEX26Q7Z412 305 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 OAFQ86UD1 273 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM183AQ8IXX5 376 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 PRELID2Q8N945 189 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 BBOF1Q8ND07 529 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 MDS2Q8NDY4 140 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ACTRT1Q8TDG2 376 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 FAM104AQ969W3 186 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 FAM3DQ96BQ1 224 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 LRRC58Q96CX6 371 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ECHDC3Q96DC8 303 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 SERPINB12Q96P63 405 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 TSSK3Q96PN8 268 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 BPIFA3Q9BQP9 254 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 HRASLS2Q9NWW9 162 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 STOX2Q9P2F5 926 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF223Q9UK11 482 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 MRPS18BQ9Y676 258 aaKnown RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 MAPKBP1O60336 1514 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 NACAE9PAV3 2078 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 C11orf94C9JXX5 98 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 SIRPB1O00241 398 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 MRPS12O15235 138 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 CD5LO43866 347 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR2F2O95006 317 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 C6orf47O95873 294 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 BGLAPP02818 100 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGKV3-11P04433 115 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 ERCC1P07992 297 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 PLEKP08567 350 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 SMIM10L1P0DMW3 83 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 MYL2P10916 166 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 BCKDHBP21953 392 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 CX3CR1P49238 355 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 EIF3EP60228 445 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC7A9P82251 487 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC25A11Q02978 314 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 RSPO1Q2MKA7 263 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 TWF2Q6IBS0 349 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF493Q6ZR52 646 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 STRADAQ7RTN6 431 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 MMAAQ8IVH4 418 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 IQCKQ8N0W5 287 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 AGR3Q8TD06 166 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 CAPSLQ8WWF8 208 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 STARD8Q92502 1023 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 NRGNQ92686 78 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 SMIM10Q96HG1 83 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 PRRC1Q96M27 445 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 GSDMAQ96QA5 445 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 TAAR1Q96RJ0 339 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 TGS1Q96RS0 853 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 NEUROG2Q9H2A3 272 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 DMAP1Q9NPF5 467 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 GPATCH2LQ9NWQ4 482 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF629Q9UEG4 869 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 WSB1Q9Y6I7 421 aa2.33□□□□□ -2.04
TRAPPC13-204ENST00000438419 CENPJQ9HC77 1338 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ADAMTSL3P82987 1691 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 PPRC1Q5VV67 1664 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CEP350Q5VT06 3117 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGLV3-16A0A075B6K0 115 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 TRAV39A0A0B4J263 110 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 LRRIQ4A6NIV6 560 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 SPECC1L-ADORA2AF8WAN1 911 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMX2-CTNND1H3BSU7 103 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CASQ2O14958 399 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CHST1O43916 411 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CACNG3O60359 315 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 HUS1O60921 280 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 SS18L1O75177 396 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGLV2-23P01705 113 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 FABP3P05413 133 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZDHHC11BP0C7U3 371 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF32P17041 273 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 HMOX2P30519 316 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 HOXA9P31269 272 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 MAS1LP35410 378 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CYB561P49447 251 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 HMGCS1Q01581 520 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 PAX5Q02548 391 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms