RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DEGS2Q6QHC5 323 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 TMPPEQ6ZT21 453 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 ASCL5Q7RTU5 278 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 NEDD4LQ96PU5 975 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 NPAP1Q9NZP6 1156 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 RABL2AQ9UBK7 228 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-216ENST00000437340 RABL2BQ9UNT1 228 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 A0A087WV48 116 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 CCDC187A0A096LP49 1063 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 AQP7P3A6NL99 342 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 CBR3O75828 277 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF17P17021 662 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 TMEM164Q5U3C3 297 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 BAIAP2L2Q6UXY1 529 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 STAC2Q6ZMT1 411 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 SPATC1Q76KD6 591 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 RAB43Q86YS6 212 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 GLB1L2Q8IW92 636 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF671Q8TAW3 534 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 ZC3HAV1LQ96H79 300 aaKnown RBP22.95■■□□□ 1.26
CPNE1-216ENST00000437340 SMAD5Q99717 465 aaKnown RBP22.95■■□□□ 1.26
CPNE1-216ENST00000437340 WACQ9BTA9 647 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 SLC25A18Q9H1K4 315 aa22.95■■□□□ 1.26
CPNE1-216ENST00000437340 SPAARA0A1B0GVQ0 90 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 SULT2B1O00204 365 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 TRAF3IP2O43734 574 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-216ENST00000437340 MPZL1O95297 269 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 IGHG1P01857 330 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 SERPINA7P05543 415 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 PRKAR1AP10644 381 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 SFTPDP35247 375 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 MAGEB1P43366 347 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 Q0VFX4 171 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 OTPQ5XKR4 325 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 TMEM225Q6GV28 225 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 MZT2BQ6NZ67 158 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 ESX1Q8N693 406 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 OR6X1Q8NH79 312 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 ORAI1Q96D31 301 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 SLC25A44Q96H78 314 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-216ENST00000437340 EMC6Q9BV81 110 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 LRP12Q9Y561 859 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 IGKV1D-43A0A0B4J1Z2 117 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 TRABD2BA6NFA1 517 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 OPN1LWP04000 364 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 MAP2K3P46734 347 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 INPP1P49441 399 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 GPR85P60893 370 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 UBE2NLQ5JXB2 153 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 HACD4Q5VWC8 232 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 RDH10Q8IZV5 341 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 NOXO1Q8NFA2 376 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 GNRHR2Q96P88 292 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 RBFOX1Q9NWB1 397 aaKnown RBP22.94■■□□□ 1.26
CPNE1-216ENST00000437340 ANKRD10Q9NXR5 420 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 DKKL1Q9UK85 242 aa22.94■■□□□ 1.26
CPNE1-216ENST00000437340 RIF1Q5UIP0 2472 aaKnown RBP22.94■■□□□ 1.26
CPNE1-216ENST00000437340 ZIC3O60481 467 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 SLC43A1O75387 559 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 UBL3O95164 117 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 FTH1P19P0C7X4 201 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 PGA4P0DJD7 388 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 PGA3P0DJD8 388 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 SOX2P48431 317 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 PITPNAQ00169 270 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF468Q5VIY5 522 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-216ENST00000437340 CATSPERDQ86XM0 798 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF433Q8N7K0 673 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-216ENST00000437340 ST7LQ8TDW4 575 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 MCHR2Q969V1 340 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 GPR87Q9BY21 358 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 FAM117AQ9C073 453 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 P4HTMQ9NXG6 502 aa22.93■■□□□ 1.26
CPNE1-216ENST00000437340 PCDHGA9Q9Y5G4 932 aaKnown RBP22.93■■□□□ 1.26
CPNE1-216ENST00000437340 DMXL1Q9Y485 3027 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF43P17038 809 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 CLRN1P58418 232 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 AGAP6Q5VW22 663 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 OR7E24Q6IFN5 339 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 LGALS14Q8TCE9 139 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 HPS1Q92902 700 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 TMEM106AQ96A25 262 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 AGAP4Q96P64 663 aa22.92■■□□□ 1.26
CPNE1-216ENST00000437340 A0A0B4J203 849 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 C21orf140B9A014 251 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 MASP2O00187 686 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 EIF1BO60739 113 aaKnown RBP22.91■■□□□ 1.26
CPNE1-216ENST00000437340 PNPP00491 289 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 P04436 131 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 H3F3AP84243 136 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 RAET1LQ5VY80 246 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 DCXRQ7Z4W1 244 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 LRRTM1Q86UE6 522 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 GPAT4Q86UL3 456 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 UBQLNLQ8IYU4 475 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 OR10H5Q8NGA6 315 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 ENKURQ8TC29 256 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 RFT1Q96AA3 541 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 THAP7Q9BT49 309 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-216ENST00000437340 R4GMQ9 66 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms