RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 OR2T4Q8NH00 348 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 IPCEF1Q8WWN9 437 aaPredicted RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 RFKQ969G6 155 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 MCHR2Q969V1 340 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 INTS12Q96CB8 462 aaKnown RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 LGALS12Q96DT0 336 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 ZMYND19Q96E35 227 aaPredicted RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 C16orf92Q96LL3 132 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 RBP7Q96R05 134 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 COPS4Q9BT78 406 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 CALHM2Q9HA72 323 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 ADGRL4Q9HBW9 690 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 HAO2Q9NYQ3 351 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 CNOT2Q9NZN8 540 aaKnown RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 KLHL9Q9P2J3 617 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 MOKQ9UQ07 419 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 EXOGQ9Y2C4 368 aaKnown RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 NOSIPQ9Y314 301 aaKnown RBP6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 FKBP7Q9Y680 259 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 HEATR5AQ86XA9 2040 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 CEP295Q9C0D2 2601 aa6.21□□□□□ -1.42
LSM3P3-201ENST00000436601 CELSR3Q9NYQ7 3312 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SPTBN4Q9H254 2564 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MBD3L4A6NDZ8 208 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MBD3L3A6NE82 208 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MBD3L5A6NJ08 208 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TRIM64CA6NLI5 447 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SNTNA6NMZ2 147 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 M0R3G1 203 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RGS10O43665 173 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SLC19A2O60779 497 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 WDR1O75083 606 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SLC43A1O75387 559 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MRPL33O75394 65 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 KHDRBS3O75525 346 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MPZL1O95297 269 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TFP02787 698 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MRPL3P09001 348 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 PSKH1P11801 424 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 GABRA1P14867 456 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 ABOP16442 354 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 EEF1B2P24534 225 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 CRABP1P29762 137 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 C21orf33P30042 268 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 AGTR1P30556 359 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 PTGER4P35408 488 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 CSNK1A1P48729 337 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF133P52736 654 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 HCCSP53701 268 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RPS7P62081 194 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 ST3GAL4Q11206 333 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RAB40BQ12829 278 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 FOXF2Q12947 444 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 IKZF1Q13422 519 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 GGTLC2Q14390 218 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 IRF3Q14653 427 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 KLHL22Q53GT1 634 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 C1orf185Q5T7R7 199 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TSPO2Q5TGU0 170 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 OTPQ5XKR4 325 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF773Q6PK81 442 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 C3P1Q6ZMU1 363 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 P4HA3Q7Z4N8 544 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MCEMP1Q8IX19 187 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SPARTQ8N0X7 666 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RPRMLQ8N4K4 120 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 PROKR2Q8NFJ6 384 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 OR4F15Q8NGB8 312 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 OR6K6Q8NGW6 343 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 OR6N1Q8NGY5 312 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MBD3L2Q8NHZ7 208 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 SMAP2Q8WU79 429 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 NSMAFQ92636 917 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MYDGFQ969H8 173 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TMEM80Q96HE8 168 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 GMPPAQ96IJ6 420 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 FOXN4Q96NZ1 517 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF649Q9BS31 505 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RACGAP1Q9H0H5 632 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 RERGLQ9H628 205 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 WDR76Q9H967 626 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 MARCH7Q9H992 704 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 FGF20Q9NP95 211 aaPredicted RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 GLRX2Q9NS18 164 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 PARPBPQ9NWS1 579 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TAS2R16Q9NYV7 291 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 GLTPQ9NZD2 209 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 EMC3Q9P0I2 261 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 BLOC1S6Q9UL45 172 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 DIMT1Q9UNQ2 313 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 UGT2A1Q9Y4X1 527 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 NCKAP5O14513 1909 aa6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 URB1O60287 2271 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 TNRC6AQ8NDV7 1962 aaKnown RBP6.2□□□□□ -1.42
LSM3P3-201ENST00000436601 A0A087WXM4 84 aa6.19□□□□□ -1.42
LSM3P3-201ENST00000436601 TVP23AA6NH52 213 aa6.19□□□□□ -1.42
LSM3P3-201ENST00000436601 DHHO43323 396 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms