RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LCORQ96JN0 433 aaPredicted RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 ADAM19Q9H013 955 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 PDE7BQ9NP56 450 aa9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
CLSTN1-203ENST00000435891 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 H3BMH7 237 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 ARPC5O15511 151 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 TACSTD2P09758 323 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 MYF5P13349 255 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 CSRP1P21291 193 aaKnown RBP9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 SERTAD2Q14140 314 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 Q3ZCU0 254 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 COL13A1Q5TAT6 717 aaPredicted RBP9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 EEF1A1P5Q5VTE0 462 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 YOD1Q5VVQ6 348 aaPredicted RBP9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 FGD2Q7Z6J4 655 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 PDZD9Q8IXQ8 264 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF676Q8N7Q3 588 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 FCAMRQ8WWV6 532 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 MIB2Q96AX9 1013 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 CMTM3Q96MX0 182 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 MOKQ9UQ07 419 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 SLC22A13Q9Y226 551 aa9.4□□□□□ -0.91
CLSTN1-203ENST00000435891 METTL21EPA6NDL7 271 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 SIGLEC6O43699 453 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 DOK2O60496 412 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 SPDEFO95238 335 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NUDT14O95848 222 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 RAB13P51153 203 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NR0B1P51843 470 aaKnown RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 CBFBQ13951 182 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 CSRP2Q16527 193 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TCTE1Q5JU00 501 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 MDGA2Q7Z553 956 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 OR52B4Q8NGK2 314 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NOX3Q9HBY0 568 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 CUTCQ9NTM9 273 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 IGHV1OR15-9A0A0B4J2B8 117 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 MEIS3P1A6NDR6 274 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 H0YIG0 161 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 PNPP00491 289 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 AKR1C2P52895 323 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 ART1P52961 327 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 MEP1BQ16820 701 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 C16orf47Q6ZP98 133 aaPredicted RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 OR51D1Q8NGF3 324 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 ADAMTS18Q8TE60 1221 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 SGK3Q96BR1 496 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 EXOSC3Q9NQT5 275 aaKnown RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TAS2R10Q9NYW0 307 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 CTSFQ9UBX1 484 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NPTNQ9Y639 398 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 IGKV3D-11A0A0A0MRZ8 115 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 BLACEA4D250 179 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TLCD2A6NGC4 264 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TMEM150CB9EJG8 249 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 BGLAPP02818 100 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NME1P15531 152 aaKnown RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 RORAP35398 523 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 ELOCQ15369 112 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TSC22D1Q15714 1073 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 FAM69AQ5T7M9 428 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 RAB11FIP2Q7L804 512 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 KDM8Q8N371 416 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 INTS14Q96SY0 518 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 CHMP1AQ9HD42 196 aaPredicted RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
CLSTN1-203ENST00000435891 TRBV5-7A0A0A0MS05 114 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 FITM1A5D6W6 292 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ANXA2P2A6NMY6 339 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ANXA2P07355 339 aaKnown RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ITGA5P08648 1049 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 RNF224P0DH78 156 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 EBPQ15125 230 aaKnown RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 RAB30Q15771 203 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 SHISA6Q6ZSJ9 500 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 RELL2Q8NC24 303 aaPredicted RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ARL5BQ96KC2 179 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 PFDN5Q99471 154 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 WDR77Q9BQA1 342 aaPredicted RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 PTDSS2Q9BVG9 487 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OR11A1Q9GZK7 315 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 PIPOXQ9P0Z9 390 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 SCP2D1Q9UJQ7 156 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 A0A1B0GW55 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 MFSD2BA6NFX1 497 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 FRG2CA6NGY1 282 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms