RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FAM90A9PA6NNJ1 464 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 GRXCR1A8MXD5 290 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 E9PQ18 207 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 NPIPB9F8W1W9 429 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SCAMP1O15126 338 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CBR3O75828 277 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 IFNA4P05014 189 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SLC25A6P12236 298 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PDHA2P29803 388 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 THBS4P35443 961 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RPS25P62851 125 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RHEBQ15382 184 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TBRG1Q3YBR2 411 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 VRK2Q86Y07 508 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MAML2Q8IZL2 1156 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TEX29Q8N6K0 151 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SLC25A44Q96H78 314 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 NMNAT2Q9BZQ4 307 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 METTL17Q9H7H0 456 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ELOVL3Q9HB03 270 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 COQ3Q9NZJ6 369 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 BHLHE40O14503 412 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 HRO43593 1189 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GTF2F2P13984 249 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FUT1P19526 365 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GABRA3P34903 492 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 KIR2DL1P43626 348 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PRRT3Q5FWE3 981 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PERM1Q5SV97 790 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 DMKNQ6E0U4 476 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 Q6ZSR6 202 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMPRSS12Q86WS5 348 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 BEST3Q8N1M1 668 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 EIF4E3Q8N5X7 224 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PLPP5Q8NEB5 264 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SCLYQ96I15 445 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GPER1Q99527 375 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TEAD3Q99594 435 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NKX6-2Q9C056 277 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SLC2A9Q9NRM0 540 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMED7Q9Y3B3 224 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TIMM10BQ9Y5J6 103 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MALRD1Q5VYJ5 2156 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CEACAM18A8MTB9 384 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF587BE7ETH6 402 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 HTR3BO95264 441 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CTSLP07711 333 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PTHLHP12272 177 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 S100A11P31949 105 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NXPH1P58417 271 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB8AP61006 207 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SMAD2Q15796 467 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NKPD1Q17RQ9 610 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MTFR2Q6P444 385 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GSG1LQ6UXU4 331 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FAM122BQ7Z309 247 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CNRIP1Q96F85 164 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM246Q9BRR3 403 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 KPTNQ9Y664 436 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR2AT4A6NND4 320 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 F5H5P2 479 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 EPHA8P29322 1005 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TNFSF8P32971 234 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PSMB10P40306 273 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CDKN1CP49918 316 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TSPAN5P62079 268 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ACSM3Q53FZ2 586 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB6CQ53S08 254 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR7E24Q6IFN5 339 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OGFOD3Q6PK18 319 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM200AQ86VY9 491 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM151BQ8IW70 566 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FAM46AQ96IP4 442 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OXGR1Q96P68 337 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB6CQ9H0N0 254 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB18Q9NP72 206 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 LIN7CQ9NUP9 197 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TRBV5-5A0A0J9YX44 114 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 METTL12A8MUP2 240 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 WNT11O96014 354 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 UCNP55089 124 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SKP2Q13309 424 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GABRA6Q16445 453 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FAM209BQ5JX69 171 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 C22orf42Q6IC83 251 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GLDNQ6ZMI3 551 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ELMOD2Q8IZ81 293 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ARMC10Q8N2F6 343 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 JAGN1Q8N5M9 183 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PHOSPHO1Q8TCT1 267 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF286AQ9HBT8 521 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF346Q9UL40 294 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MED12Q93074 2177 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM218A2RU14 115 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CYR61O00622 381 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 DUS4LO95620 317 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FBXO45P0C2W1 286 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms