RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 COPS3Q9UNS2 423 aa16.12■□□□□ 0.17
HMGN1-206ENST00000431390 SPTBN1Q01082 2364 aaKnown RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 SPTAN1Q13813 2472 aaKnown RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF593O00488 134 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 DHHO43323 396 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 TDGF1P3P51864 188 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 HCCSP53701 268 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 ADAM8P78325 824 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 ACSM1Q08AH1 577 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 MLLT11Q13015 90 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 PCK2Q16822 640 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 CDONQ4KMG0 1287 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 FOXL2NBQ6ZUU3 175 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 SSX6Q7RTT6 188 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 SYS1Q8N2H4 156 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 GPR137CQ8N3F9 429 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 OR5M9Q8NGP3 310 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 OTOSQ8NHW6 89 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 SPRYD4Q8WW59 207 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 GATAD2BQ8WXI9 593 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 GMPPAQ96IJ6 420 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-206ENST00000431390 FOXN4Q96NZ1 517 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 TRIB1Q96RU8 372 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 CALHM2Q9HA72 323 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 CEPT1Q9Y6K0 416 aa16.11■□□□□ 0.17
HMGN1-206ENST00000431390 SCG5P05408 212 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 HSMCR30P0CW71 290 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 GABRA1P14867 456 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 ALOX5APP20292 161 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 CD79BP40259 229 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 DOC2BQ14184 412 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 KCNMB1Q16558 191 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 ACSF3Q4G176 576 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-206ENST00000431390 DPY19L4Q7Z388 723 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 CISD2Q8N5K1 135 aaKnown RBP16.1■□□□□ 0.17
HMGN1-206ENST00000431390 RFLNBQ8N5W9 214 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF454Q8N9F8 522 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 WNT2BQ93097 391 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 YIPF6Q96EC8 236 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 OPALINQ96PE5 141 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 SLCO5A1Q9H2Y9 848 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 KCNG2Q9UJ96 466 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 LAMP5Q9UJQ1 280 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 UGT2A1Q9Y4X1 527 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 GTF3C1Q12789 2109 aa16.1■□□□□ 0.17
HMGN1-206ENST00000431390 A0A1W2PPL8 197 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 CD8B2A6NJW9 211 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 H3BSA7 217 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 WDR1O75083 606 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SS18L1O75177 396 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 UPK3AO75631 287 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 MPZL1O95297 269 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 MT-ND5P03915 603 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 PTGER4P35408 488 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF84P51523 738 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 BDH1Q02338 343 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 STK11Q15831 433 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 FOXB2Q5VYV0 432 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 KCTD20Q7Z5Y7 419 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 CLVS1Q8IUQ0 354 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 OR10H5Q8NGA6 315 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SNX33Q8WV41 574 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ASB17Q8WXJ9 295 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 C11orf40Q8WZ69 217 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SLX1AQ9BQ83 275 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 PLEKHB1Q9UF11 243 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 CLEC4AQ9UMR7 237 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ZNHIT1O43257 154 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 TMCC2O75069 709 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SPARCP09486 303 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 GNLYP22749 145 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 AGTR1P30556 359 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 LIPAP38571 399 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 GUCA1AP43080 201 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 EGR3Q06889 387 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 MEP1BQ16820 701 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF684Q5T5D7 378 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 GPR107Q5VW38 600 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 NSUN5P2Q63ZY6 315 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SLC18B1Q6NT16 456 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ZNF420Q8TAQ5 688 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 CPT1CQ8TCG5 803 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 DGCR14Q96DF8 476 aaKnown RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 C4orf36Q96KX1 117 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 ISG20L2Q9H9L3 353 aaKnown RBP16.09■□□□□ 0.17
HMGN1-206ENST00000431390 SEC61A2Q9H9S3 476 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 POLE4Q9NR33 117 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 BABAM2Q9NXR7 383 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 KLHDC2Q9Y2U9 406 aa16.09■□□□□ 0.17
HMGN1-206ENST00000431390 MED12LQ86YW9 2145 aa16.08■□□□□ 0.17
HMGN1-206ENST00000431390 SHANK1Q9Y566 2161 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF701M0R085 212 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-206ENST00000431390 CCRL2O00421 344 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 AGFG2O95081 481 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 PSKH1P11801 424 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 CD36P16671 472 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 TGFBR2P37173 567 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 RGS6P49758 472 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 TAS2R43P59537 309 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 LSM6P62312 80 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms