RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 MEGF11A6BM72 1044 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 MFSD2BA6NFX1 497 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TLCD2A6NGC4 264 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 A6NJ64 397 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ALG1L2C9J202 215 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ICOSLGO75144 302 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 AQP8O94778 261 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 PMS2P2O95744 297 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 WNT11O96014 354 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 APOC1P02654 83 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ITGA5P08648 1049 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 GABRA1P14867 456 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 EN2P19622 333 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 FSTP19883 344 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 RIDAP52758 137 aaKnown RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 EFNB2P52799 333 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 HLA-DQA1Q5Y7H0 255 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TSSK4Q6SA08 328 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 LRRC69Q6ZNQ3 347 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 MUC20Q8N307 709 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 FRMD1Q8N878 549 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ZNF321PQ8N8H1 164 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CLEC1AQ8NC01 280 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 OR51S1Q8NGJ8 323 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ZNF519Q8TB69 540 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TNFAIP8L1Q8WVP5 186 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 EDAQ92838 391 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 WBP1Q96G27 269 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ELF4Q99607 663 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 SLC25A21Q9BQT8 299 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 REG4Q9BYZ8 158 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 OR8D2Q9GZM6 311 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ATG5Q9H1Y0 275 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TXNIPQ9H3M7 391 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 C1orf198Q9H425 327 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 EXO5Q9H790 373 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 MYOZ1Q9NP98 299 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 SDHAF2Q9NX18 166 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CD207Q9UJ71 328 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CYP8B1Q9UNU6 501 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 EML5Q05BV3 1969 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TMEM272A0A1B0GTI8 110 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 KRBOX1C9JBD0 128 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 C11orf98E9PRG8 122 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GOSR2O14653 212 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TO15178 435 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ARPC5O15511 151 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GATCO43716 136 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 PRKNO60260 465 aaPredicted RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 IGHMP01871 453 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ITGB2P05107 769 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ZNF35P13682 527 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 RPS27P42677 84 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 MAP2K6P52564 334 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 CAPZA1P52907 286 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GK2Q14410 553 aaPredicted RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 SHHQ15465 462 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ELAVL1Q15717 326 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 ACKR1Q16570 336 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ODF4Q2M2E3 257 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ARHGAP40Q5TG30 622 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 C5orf46Q6UWT4 87 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GKN2Q86XP6 184 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GABRG1Q8N1C3 465 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 OR5M1Q8NGP8 315 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ZNF721Q8TF20 911 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 ZNF524Q96C55 264 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 MVB12AQ96EY5 273 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 RBM14Q96PK6 669 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 ZNF587Q96SQ5 575 aaPredicted RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 SEMA4CQ9C0C4 833 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TMEM138Q9NPI0 162 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 PPP1R14DQ9NXH3 145 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 F5P12259 2224 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 MKI67P46013 3256 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 IGKV3D-11A0A0A0MRZ8 115 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 IGLV1-36A0A0B4J1U3 117 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 A8MUA0 341 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TSPAN2O60636 221 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 SCO1O75880 301 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 DDAH2O95865 285 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GPANK1O95872 356 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 CD3DP04234 171 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 LPLP06858 475 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 NMBP08949 121 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 RPA2P15927 270 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 CRABP1P29762 137 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 POLR2HP52434 150 aaKnown RBP10.18□□□□□ -0.78
USP4-205ENST00000431357 H2BFSP57053 126 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TMEM225Q6GV28 225 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 TMEM205Q6UW68 189 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 CATSPERDQ86XM0 798 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 OR6M1Q8NGM8 313 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 OR1J4Q8NGS1 313 aa10.18□□□□□ -0.78
USP4-205ENST00000431357 SLC25A28Q96A46 364 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms