RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 MGRN1O60291 552 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 KHDRBS3O75525 346 aaKnown RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 MPZL1O95297 269 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 BAG2O95816 211 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 PATE4P0C8F1 98 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 OR8G3PP0DMU2 310 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 NPR2P20594 1047 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 IGFBP5P24593 272 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 LAP3P28838 519 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 ZNF84P51523 738 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 ALDH3A2P51648 485 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 NPRL3Q12980 569 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 CRMP1Q14194 572 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 BEX5Q5H9J7 111 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 LINC01590Q5TEZ4 76 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 C12orf73Q69YU5 71 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 UGT2A3Q6UWM9 527 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 MDP1Q86V88 176 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 JAZF1Q86VZ6 243 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 LILRB1Q8NHL6 650 aaPredicted RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 FBXO17Q96EF6 278 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 C1QTNF6Q9BXI9 259 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 FN3KQ9H479 309 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 SEC61A2Q9H9S3 476 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 SRA1Q9HD15 236 aaKnown RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 RPRD1BQ9NQG5 326 aaKnown RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 KIF17Q9P2E2 1029 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 KLHL21Q9UJP4 597 aa10.81□□□□□ -0.68
USP40-205ENST00000430158 COA3Q9Y2R0 106 aaPredicted RBP10.81□□□□□ -0.68
USP40-205ENST00000430158 TEX15Q9BXT5 2789 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 IGHV1-18A0A0C4DH31 117 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CYSRT1A8MQ03 144 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CASKO14936 926 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 GPANK1O95872 356 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 WNT11O96014 354 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 PLAUP00749 431 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 RENP00797 406 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 TFP02787 698 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 HMGN1P05114 100 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CELA3BP08861 270 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CST2P09228 141 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 PAX7P23759 505 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CD40P25942 277 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 CRABP1P29762 137 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 SSTR2P30874 369 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 ZNF83P51522 516 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 TLE4Q04727 773 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 ZNF584Q8IVC4 421 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 GLB1L2Q8IW92 636 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 PLPPR2Q96GM1 343 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 FOXN4Q96NZ1 517 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 MBOAT4Q96T53 435 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 C9orf16Q9BUW7 83 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 ZNF416Q9BWM5 594 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 GRIP2Q9C0E4 1043 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 DCLRE1BQ9H816 532 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 PLEKHF2Q9H8W4 249 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
USP40-205ENST00000430158 HINT3Q9NQE9 182 aaKnown RBP10.8□□□□□ -0.68
USP40-205ENST00000430158 MRPL22Q9NWU5 206 aaKnown RBP10.8□□□□□ -0.68
USP40-205ENST00000430158 FAM183AA6NL82 134 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 FAM171A2A8MVW0 826 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 PRKYO43930 277 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 CECR9P0C854 216 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 CLUP10909 449 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 PSKH1P11801 424 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 SPI1P17947 270 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 MSR1P21757 451 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 SLC2A5P22732 501 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 PYCR1P32322 319 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 GGT2P36268 569 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 ARR3P36575 388 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 UBE2NP61088 152 aaKnown RBP10.79□□□□□ -0.68
USP40-205ENST00000430158 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
USP40-205ENST00000430158 RAB1AP62820 205 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 HIST1H3AP68431 136 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 SGCAQ16586 387 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 OGFRL1Q5TC84 451 aaPredicted RBP10.79□□□□□ -0.68
USP40-205ENST00000430158 HIST2H3PS2Q5TEC6 136 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 OTPQ5XKR4 325 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 LPCAT4Q643R3 524 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 ZBTB49Q6ZSB9 765 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 HIST2H3AQ71DI3 136 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 C11orf40Q8WZ69 217 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 PIK3IP1Q96FE7 263 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 SLC38A2Q96QD8 506 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 MED20Q9H944 212 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 MARCH7Q9H992 704 aa10.79□□□□□ -0.68
USP40-205ENST00000430158 A0A1W2PPL8 197 aa10.78□□□□□ -0.68
USP40-205ENST00000430158 RIIAD1A6NNX1 92 aa10.78□□□□□ -0.68
USP40-205ENST00000430158 M0R129 80 aa10.78□□□□□ -0.68
USP40-205ENST00000430158 UBL3O95164 117 aa10.78□□□□□ -0.68
USP40-205ENST00000430158 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms