RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 FAM57BQ71RH2 274 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MGLLQ99685 303 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 EMC6Q9BV81 110 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MMP28Q9H239 520 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ACKR4Q9NPB9 350 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MIA3Q5JRA6 1907 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 RAB6AP20340 208 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 FZD5Q13467 585 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 C19orf48Q6RUI8 117 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 DNAJB12Q9NXW2 375 aaKnown RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 NLKQ9UBE8 527 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 A0A1W2PS29 197 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF780AO75290 641 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 DNASE1P24855 282 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ADARB1P78563 741 aaKnown RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 SNTB2Q13425 540 aaKnown RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 BEX5Q5H9J7 111 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 SLC7A13Q8TCU3 470 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MED20Q9H944 212 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 SLC22A11Q9NSA0 550 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 A0A087WUU8 490 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 A0A1W2PQD3 144 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 SP1P08047 785 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 PRSS48Q7RTY5 328 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 DRAXINQ8NBI3 349 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MED18Q9BUE0 208 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 PLXNA4Q9HCM2 1894 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 TIMM8AO60220 97 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 DNAJB6O75190 326 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 RPA2P15927 270 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CD79BP40259 229 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF45Q02386 682 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 RNPS1Q15287 305 aaKnown RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM244Q5VVB8 128 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 NIPSNAP1Q9BPW8 284 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 TFAP2AP05549 437 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CNN3Q15417 329 aaKnown RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 EXOSC3Q9NQT5 275 aaKnown RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 GNG13Q9P2W3 67 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 BOLA2-SMG1P6H3BVE0 249 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 SOCS6O14544 535 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 TIAF1O95411 115 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 ALPLP05186 524 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 ACKR1Q16570 336 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 SLC22A6Q4U2R8 563 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 EMC4Q5J8M3 183 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CALHM3Q86XJ0 350 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 IL17BQ9UHF5 180 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 METTL15A6NJ78 407 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 H0Y8G0 127 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CTSBP07858 339 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 QDPRP09417 244 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 RPL18Q07020 188 aaKnown RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 WFDC8Q8IUA0 241 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 MAGEA5P43359 124 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 OR7E24Q6IFN5 339 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 C17orf47Q8NEP4 570 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 OR2M7Q8NG81 312 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 WDR76Q9H967 626 aa11.68□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF346Q9UL40 294 aaKnown RBP11.68□□□□□ -0.54
PTCH1-207ENST00000429896 H7C2Y5 167 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 GABRA1P14867 456 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 MSR1P21757 451 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 BMXP51813 675 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 PSG6Q00889 435 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 Q96M85 177 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 UBQLN3Q9H347 655 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 FBXO34Q9NWN3 711 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ABHD16AO95870 558 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 CCL3P10147 92 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ALDH3B1P43353 468 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 DIO1P49895 249 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 WNT4P56705 351 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 CRMP1Q14194 572 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF181Q2M3W8 571 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 THEM4Q5T1C6 240 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 KCTD20Q7Z5Y7 419 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 EXO1Q9UQ84 846 aaKnown RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 PRELID1Q9Y255 219 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 COA3Q9Y2R0 106 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 FXYD1O00168 92 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 IL7P13232 177 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 HTR2BP41595 481 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms