RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 GAAP10253 952 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 CDAP32320 146 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 RIPK1Q13546 671 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 TEX30Q5JUR7 227 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 DEPDC4Q8N2C3 294 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 SLC26A10Q8NG04 563 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 HRASLS5Q96KN8 279 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 SLC29A1Q99808 456 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 CELSR2Q9HCU4 2923 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF503-AS2A6NEH8 195 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PRODHO43272 600 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SEC14L2O76054 403 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 RAB36O95755 333 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 COX5BP10606 129 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 CD79AP11912 226 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF14P17017 642 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SPI1P17947 270 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 EPHA2P29317 976 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF83P51522 516 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PLP2Q04941 152 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ENDOGQ14249 297 aaKnown RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PCK2Q16822 640 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 SLC25A30Q5SVS4 291 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF771Q7L3S4 317 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 MDP1Q86V88 176 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ALDH16A1Q8IZ83 802 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 CYB561A3Q8NBI2 242 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 C11orf40Q8WZ69 217 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 FBXO17Q96EF6 278 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PIK3IP1Q96FE7 263 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF416Q9BWM5 594 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 CLEC4MQ9H2X3 399 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-204ENST00000429629 RNPEPL1Q9HAU8 725 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 CCNB1IP1Q9NPC3 277 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 TVP23BQ9NYZ1 205 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 ATPIF1Q9UII2 106 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 RNF115Q9Y4L5 304 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 CENPEQ02224 2701 aa13.01□□□□□ -0.33
GARNL3-204ENST00000429629 PKDREJQ9NTG1 2253 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 IGHV1-18A0A0C4DH31 117 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 A0A1W2PPL8 197 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 A0A1W2PR80 420 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 H0YHG0 523 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 GLCEO94923 617 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 CRYAAP02489 173 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 SCG5P05408 212 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 FMO3P31513 532 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 POLR2IP36954 125 aaKnown RBP13□□□□□ -0.33
GARNL3-204ENST00000429629 CAPZA2P47755 286 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 HIST1H3AP68431 136 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 TEKQ02763 1124 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 BSPH1Q075Z2 132 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 SCRN3Q0VDG4 424 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 AQP6Q13520 282 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 TRIP10Q15642 601 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 OGFRL1Q5TC84 451 aaPredicted RBP13□□□□□ -0.33
GARNL3-204ENST00000429629 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 HIST2H3AQ71DI3 136 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 C1orf174Q8IYL3 243 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 OR1J2Q8NGS2 313 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 FGFBP3Q8TAT2 258 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
GARNL3-204ENST00000429629 PLEKHF2Q9H8W4 249 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 MARCH7Q9H992 704 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 NDRG4Q9ULP0 352 aaKnown RBP13□□□□□ -0.33
GARNL3-204ENST00000429629 EDARQ9UNE0 448 aa13□□□□□ -0.33
GARNL3-204ENST00000429629 IQCMA0A1B0GVH7 501 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 M0R1B8 84 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 SLC16A6O15403 523 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 TMCC2O75069 709 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 TFP02787 698 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 CECR9P0C854 216 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 ZNF35P13682 527 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 PRF1P14222 555 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 CDC42P60953 191 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 PSG4Q00888 419 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 NAAAQ02083 359 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 PIGFQ07326 219 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 TMED1Q13445 227 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 LINC01590Q5TEZ4 76 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 NXNL2Q5VZ03 156 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 RHOUQ7L0Q8 258 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 CDC20BQ86Y33 519 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 CPOQ8IVL8 374 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 LRRC18Q8N456 261 aa12.99□□□□□ -0.33
GARNL3-204ENST00000429629 GJC3Q8NFK1 279 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms