RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 ZNF322Q6U7Q0 402 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 LRRC18Q8N456 261 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 PPP1R1CQ8WVI7 109 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 NUDCD2Q8WVJ2 157 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 FGF14Q92915 247 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 FAM83CQ9BQN1 747 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 GAL3ST2Q9H3Q3 398 aa13.18□□□□□ -0.3
SYNGAP1-203ENST00000428982 MFNGO00587 321 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 TMEM127O75204 238 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 ACKR3P25106 362 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR3A1P47881 315 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 H2BFSP57053 126 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 DCDP81605 110 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 DCAF12L2Q5VW00 463 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 FAM180AQ6UWF9 173 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 SNIP1Q8TAD8 396 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 LCORQ96JN0 433 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 MCHR1Q99705 422 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 S100A7P31151 101 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 LASP1Q14847 261 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 SLC35D3Q5M8T2 416 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR4C11Q6IEV9 310 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR1J2Q8NGS2 313 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR2L2Q8NH16 312 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PHB2Q99623 299 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PRDM7Q9NQW5 492 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 INPP5EQ9NRR6 644 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 HEBP2Q9Y5Z4 205 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 AMY2AP04746 511 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 NDUFV2P19404 249 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PRRT3Q5FWE3 981 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 WDR88Q6ZMY6 472 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 PPP1R3BQ86XI6 285 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 ARRDC3Q96B67 414 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 IFNA6P05013 189 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 ALPPL2P10696 532 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 LIPCP11150 499 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 CD22P20273 847 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 SLC2A5P22732 501 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 MSX1P28360 303 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 ARSJQ5FYB0 599 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 TMEM255AQ5JRV8 349 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 CD180Q99467 661 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 TTTY10Q9BZA0 68 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 APMAPQ9HDC9 416 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 FBXW2Q9UKT8 454 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 MOKQ9UQ07 419 aa13.17□□□□□ -0.3
SYNGAP1-203ENST00000428982 CLEC3AO75596 197 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 EFEMP2O95967 443 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR13C7P0DN81 318 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 PGAM2P15259 253 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 CBLN4Q9NTU7 201 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 MEIS3P1A6NDR6 274 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 M0R3H8 397 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 ETHE1O95571 254 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 CD200P41217 278 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 CBFBQ13951 182 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 INPP5JQ15735 1006 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 KCND3Q9UK17 655 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 A6NCN8 305 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 MMP7P09237 267 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 TFPIP10646 304 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 EDNRAP25101 427 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 CD82P27701 267 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 SHC2P98077 582 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 GAS6Q14393 721 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 GPBAR1Q8TDU6 330 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 LMAN1LQ9HAT1 526 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
SYNGAP1-203ENST00000428982 SLC22A31A6NKX4 558 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 ERI3O43414 337 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 GSTZ1O43708 216 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 SRSF3P84103 164 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 CLN3Q13286 438 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 GUK1Q16774 197 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 RIPPLY2Q5TAB7 128 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 PRPF38BQ5VTL8 546 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 CD300LDQ6UXZ3 194 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms