RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 EIF4E2O60573 245 aaKnown RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 PIPP12273 146 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 THBS2P35442 1172 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 SOX18P35713 384 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 GABRA2P47869 451 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 SSX1Q16384 188 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 GAB4Q2WGN9 574 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 C1orf140Q5VVS0 124 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 VASNQ6EMK4 673 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 FAM181AQ8N9Y4 354 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 CNN2Q99439 309 aaKnown RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 NDUFB11Q9NX14 153 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 FOXJ2Q9P0K8 574 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 MGAMO43451 1857 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 IGF2RP11717 2491 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 LOC102725191A0A1B0GVB3 256 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 MASP2O00187 686 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CFL1P23528 166 aaKnown RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CSF2RBP32927 897 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 RAD52P43351 418 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CCR6P51684 374 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ACTC1P68032 377 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ACTA1P68133 377 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 TSC22D1Q15714 1073 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 OCLNQ16625 522 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SCGB2B2Q4G0G5 96 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 FHL5Q5TD97 284 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SLC18B1Q6NT16 456 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 QSOX2Q6ZRP7 698 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SLC35D2Q76EJ3 337 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 OR4N2Q8NGD1 307 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF501Q96CX3 271 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SDF2Q99470 211 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 C19orf67A6NJJ6 358 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF814B7Z6K7 855 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 LGALS8O00214 317 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 TNFSF11O14788 317 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM225BP0DP42 221 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SRP9P49458 86 aaKnown RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CEBPGP53567 150 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF169Q14929 603 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 P2RY14Q15391 338 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM69Q5SWH9 247 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 OGFOD3Q6PK18 319 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 RNF165Q6ZSG1 346 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 FAM26EQ8N5C1 309 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 MS4A15Q8N5U1 240 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 AMER3Q8N944 861 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 KATNB1Q9BVA0 655 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 A0A0G2JMP0 313 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 A0A0X1KG70 313 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ZC3H12DA2A288 527 aaKnown RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 METTL21EPA6NDL7 271 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 F5H0A9 414 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-204ENST00000427724 MAS1P04201 325 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 ABCD3P28288 659 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 PMP22Q01453 160 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 AANATQ16613 207 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 BHLHE23Q8NDY6 225 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 OR4M2Q8NGB6 313 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 C11orf40Q8WZ69 217 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SLC35A4Q96G79 324 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SLC25A18Q9H1K4 315 aa9.66□□□□□ -0.86
TCOF1-204ENST00000427724 SLC2A10O95528 541 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 LINC00271P0C7V0 271 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF16P17020 682 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 CLN3Q13286 438 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 EIF2B1Q14232 305 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 OR2A2Q6IF42 318 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TEX261Q6UWH6 196 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TCTE3Q8IZS6 198 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF615Q8N8J6 731 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 INO80EQ8NBZ0 244 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM185AQ8NFB2 350 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 OR1J2Q8NGS2 313 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 NT5CQ8TCD5 201 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 DDOQ99489 341 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TESQ9UGI8 421 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 U3KQ87 197 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 KRBOX1C9JBD0 128 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 CD59P13987 128 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 FABP5Q01469 135 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ZIC1Q15915 447 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 C3AR1Q16581 482 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 FCRLAQ7L513 359 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 KCTD20Q7Z5Y7 419 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 FCAMRQ8WWV6 532 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SLC41A2Q96JW4 573 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 OR2M2Q96R28 347 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms