RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TVP23BQ9NYZ1 205 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 PRR14LQ5THK1 2151 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 IGHV1-18A0A0C4DH31 117 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 PTAFRP25105 342 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 PYCR1P32322 319 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 PTDSS1P48651 473 aaKnown RBP21.31■■□□□ 1
VEGFA-209ENST00000425836 CENPAP49450 140 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 SLC25A1P53007 311 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ENDOGQ14249 297 aaKnown RBP21.31■■□□□ 1
VEGFA-209ENST00000425836 C3orf36Q3SXR2 165 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 SLC36A2Q495M3 483 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 SLX4IPQ5VYV7 408 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 OTPQ5XKR4 325 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 OR2T4Q8NH00 348 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 C11orf40Q8WZ69 217 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 FBXO17Q96EF6 278 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 SLC38A2Q96QD8 506 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 TMEM204Q9BSN7 226 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 ZNF416Q9BWM5 594 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 KCNN2Q9H2S1 579 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 DCLRE1BQ9H816 532 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 CRYBG3Q68DQ2 2970 aa21.31■■□□□ 1
VEGFA-209ENST00000425836 FAM183AA6NL82 134 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 CELA3BP08861 270 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 CST2P09228 141 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 MMP7P09237 267 aaPredicted RBP21.3■■□□□ 1
VEGFA-209ENST00000425836 GAAP10253 952 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 TRIP10Q15642 601 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 MYPOPQ86VE0 399 aaPredicted RBP21.3■■□□□ 1
VEGFA-209ENST00000425836 PTP4A1Q93096 173 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 HCAR1Q9BXC0 346 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 RNF121Q9H920 327 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 MED20Q9H944 212 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 ORC6Q9Y5N6 252 aa21.3■■□□□ 1
VEGFA-209ENST00000425836 PLAUP00749 431 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 CD3EP07766 207 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 CLUP10909 449 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 SPI1P17947 270 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 IDH3GP51553 393 aaPredicted RBP21.29■■□□□ 1
VEGFA-209ENST00000425836 KRTAP10-9P60411 292 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 GLO1Q04760 184 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 SNAPC1Q16533 368 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 KCNMB1Q16558 191 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 CDC20BQ86Y33 519 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 PROKR2Q8NFJ6 384 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 OR51L1Q8NGJ5 315 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 RNF115Q9Y4L5 304 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 CELSR2Q9HCU4 2923 aa21.29■■□□□ 1
VEGFA-209ENST00000425836 FLNBO75369 2602 aaKnown RBP21.28■■□□□ 1
VEGFA-209ENST00000425836 ABCD4O14678 606 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 RAB36O95755 333 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 TFP02787 698 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 GYPBP06028 91 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 CECR9P0C854 216 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 RAD23AP54725 363 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 HSF2Q03933 536 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 LPCAT4Q643R3 524 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 C12orf73Q69YU5 71 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 TMEM53Q6P2H8 277 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 SLC26A10Q8NG04 563 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 MS4A3Q96HJ5 214 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 PLEKHA8Q96JA3 519 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 CCNB1IP1Q9NPC3 277 aa21.28■■□□□ 1
VEGFA-209ENST00000425836 NKX1-2Q9UD57 310 aaPredicted RBP21.28■■□□□ 1
VEGFA-209ENST00000425836 ZNF14P17017 642 aaPredicted RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 ZNF32P17041 273 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 PAICSP22234 425 aaKnown RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 LSM6P62312 80 aaKnown RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 SPOCK1Q08629 439 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 RAB39AQ14964 217 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 MEP1BQ16820 701 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 LRRC36Q1X8D7 754 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 ZIK1Q3SY52 487 aaPredicted RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 PLBD1Q6P4A8 553 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 ZNF704Q6ZNC4 412 aaPredicted RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 OTULINQ96BN8 352 aa21.27■■□□□ 1
VEGFA-209ENST00000425836 HINT3Q9NQE9 182 aaKnown RBP21.27■■□□□ 1
VEGFA-209ENST00000425836 C12orf71A8MTZ7 269 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 PRR23D1E9PI22 279 aaPredicted RBP21.27■□□□□ 0.99
VEGFA-209ENST00000425836 H0YHG0 523 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 PRKYO43930 277 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 PRR23D2P0DMB1 279 aaPredicted RBP21.27■□□□□ 0.99
VEGFA-209ENST00000425836 PCBD1P61457 104 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 EFNB1P98172 346 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 ADAM5Q6NVV9 412 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.27■□□□□ 0.99
VEGFA-209ENST00000425836 ZNF584Q8IVC4 421 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 CPOQ8IVL8 374 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 PIAS4Q8N2W9 510 aaPredicted RBP21.27■□□□□ 0.99
VEGFA-209ENST00000425836 TIMM10BQ9Y5J6 103 aa21.27■□□□□ 0.99
VEGFA-209ENST00000425836 FBN2P35556 2912 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 DCHS2Q6V1P9 2916 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 HLA-DQA2P01906 255 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 SERPINA5P05154 406 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 PEX2P28328 305 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 PSG4Q00888 419 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 NAAAQ02083 359 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 TEKQ02763 1124 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 SYT9Q86SS6 491 aa21.26■□□□□ 0.99
VEGFA-209ENST00000425836 MBOAT4Q96T53 435 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms