RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MESP1Q9BRJ9 268 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 SEMA4CQ9C0C4 833 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 ACTR6Q9GZN1 396 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 CHRNA10Q9GZZ6 450 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 METTL17Q9H7H0 456 aaPredicted RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 AKIRIN1Q9H9L7 192 aaPredicted RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 MMACHCQ9Y4U1 282 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 TEX51A0A1B0GUA7 166 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 NOS1APO75052 506 aaPredicted RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 OR6A2O95222 327 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TXNDC12O95881 172 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ECDO95905 644 aaPredicted RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 GP1BBP13224 206 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 CD59P13987 128 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 CCKBRP32239 447 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 RAD52P43351 418 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SLC6A8P48029 635 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SELENOPP49908 381 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TAS2R20P59543 309 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ELAVL1Q15717 326 aaKnown RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 MEP1BQ16820 701 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 EMC4Q5J8M3 183 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 FAM69AQ5T7M9 428 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 GPR139Q6DWJ6 353 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 LRRTM1Q86UE6 522 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 NAXDQ8IW45 347 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 GLB1L2Q8IW92 636 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 DND1Q8IYX4 353 aaKnown RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 OR8H3Q8N146 312 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 PRSS35Q8N3Z0 413 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SUMF1Q8NBK3 374 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 GPR148Q8TDV2 347 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 HAVCR1Q96D42 359 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 CMTM3Q96MX0 182 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 OR11A1Q9GZK7 315 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 KCNK15Q9H427 330 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ELOVL3Q9HB03 270 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TAS2R5Q9NYW4 299 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TRAV36DV7A0A075B6V5 113 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 MEIKINA0A087WXM9 373 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 IGHV3-20A0A0C4DH32 117 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 PCNX2A6NKB5 2137 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 SLC16A7O60669 478 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ZNF806P0C7X5 589 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 HAAOP46952 286 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 PER3P56645 1201 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ADAMTS20P59510 1910 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ZP1P60852 638 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ACKR1Q16570 336 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 FGD2Q7Z6J4 655 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ZNF227Q86WZ6 799 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 PCNPQ8WW12 178 aaKnown RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 PPP1R14AQ96A00 147 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 MIB2Q96AX9 1013 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 GAL3ST1Q99999 423 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ADAM19Q9H013 955 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 NOX3Q9HBY0 568 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 TMEM9BQ9NQ34 198 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 SEMA5BQ9P283 1151 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
CUX1-205ENST00000425244 SLC22A13Q9Y226 551 aa9.61□□□□□ -0.87
CUX1-205ENST00000425244 IGKV3D-11A0A0A0MRZ8 115 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 TRBV5-5A0A0J9YX44 114 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 SUSD5O60279 629 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 BGLAPP02818 100 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 RAB40ALP0C0E4 278 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 CALCBP10092 127 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 MELKQ14680 651 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ETFDHQ16134 617 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 HYAL4Q2M3T9 481 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ZBTB37Q5TC79 503 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 C16orf47Q6ZP98 133 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 LANCL3Q6ZV70 420 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 MAMDC2Q7Z304 686 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 KDM8Q8N371 416 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 RAB40AQ8WXH6 277 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 OR1F2PQ96R84 312 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 DPCDQ9BVM2 203 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 ZNF436Q9C0F3 470 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 WWTR1Q9GZV5 400 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 PLEKHA1Q9HB21 404 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 DLL4Q9NR61 685 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 TMEM14AQ9Y6G1 99 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 A0A1W2PQ72 361 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 MEIS3P1A6NDR6 274 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 TMEM212A6NML5 194 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ACOT7O00154 380 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 DOK2O60496 412 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 IGF2P01344 180 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ZNF28P17035 718 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms