RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TRIM64A6NGJ6 449 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 TRIM64BA6NI03 449 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 AQP12BA6NM10 295 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 SSX4O60224 188 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 NDUFS7O75251 213 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 KHDRBS3O75525 346 aaKnown RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 DNAJC8O75937 253 aaPredicted RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 CCNB2O95067 398 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 CST2P09228 141 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RAP2AP10114 183 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 ZNF35P13682 527 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 APEHP13798 732 aaKnown RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 ZNF26P17031 533 aaPredicted RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 LAP3P28838 519 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 NOS3P29474 1203 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 GLRXP35754 106 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RASSF2P50749 326 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 EFNA4P52798 201 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 HMGA2P52926 109 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 TSPAN31Q12999 210 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 FLOT2Q14254 428 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RFX4Q33E94 735 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 FAM27BQ5VT28 67 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 OR2T5Q6IEZ7 315 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RPL13AP3Q6NVV1 102 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 C1orf94Q6P1W5 598 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 DNM1P34Q6PK57 102 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 CLEC2AQ6UVW9 174 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 UNQ6126/PRO20091Q6UXV3 157 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 FAM122BQ7Z309 247 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 AQP12AQ8IXF9 295 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 OR52L1Q8NGH7 329 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 OR2T29Q8NH02 315 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 FGFBP3Q8TAT2 258 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 NABP1Q96AH0 204 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RASD2Q96D21 266 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 ZNF75AQ96N20 296 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 ERMAPQ96PL5 475 aaPredicted RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 VRK1Q99986 396 aaPredicted RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 RHNO1Q9BSD3 238 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 WACQ9BTA9 647 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 SYT4Q9H2B2 425 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 RERGLQ9H628 205 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 SAMHD1Q9Y3Z3 626 aaKnown RBP9.46□□□□□ -0.9
USP49-204ENST00000423567 TIMM10BQ9Y5J6 103 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 USF3Q68DE3 2245 aa9.46□□□□□ -0.9
USP49-204ENST00000423567 DHRS12A0PJE2 317 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 C12orf71A8MTZ7 269 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 SOCS2O14508 198 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 GNGT2O14610 69 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 IMPA2O14732 288 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 SLC16A7O60669 478 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 ATP5HO75947 161 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 PPP1R3DO95685 299 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 TXNDC12O95881 172 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 RENP00797 406 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 MMP7P09237 267 aaPredicted RBP9.45□□□□□ -0.9
USP49-204ENST00000423567 CSF3P09919 207 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 ZNF32P17041 273 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 CCNOP22674 350 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 CRABP1P29762 137 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 RAD52P43351 418 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 GSSP48637 474 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 PPOXP50336 477 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 SELENOVP59797 346 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 TNK1Q13470 666 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 GK3PQ14409 553 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 PABPC1L2AQ5JQF8 200 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 PGBD2Q6P3X8 592 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 ZNF584Q8IVC4 421 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 SVOPLQ8N434 492 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 MRPL24Q96A35 216 aaKnown RBP9.45□□□□□ -0.9
USP49-204ENST00000423567 GPA33Q99795 319 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 CHID1Q9BWS9 393 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 YY1AP1Q9H869 796 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 POLE4Q9NR33 117 aa9.45□□□□□ -0.9
USP49-204ENST00000423567 VSX1Q9NZR4 365 aaPredicted RBP9.45□□□□□ -0.9
USP49-204ENST00000423567 EIF3KQ9UBQ5 218 aaKnown RBP9.45□□□□□ -0.9
USP49-204ENST00000423567 CELSR1Q9NYQ6 3014 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 ACOT8O14734 319 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 ARPC3O15145 178 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 IDH3BO43837 385 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 SNAP29O95721 258 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 CST1P01037 141 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 LCKP06239 509 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 CCL2P13500 99 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 CTLA4P16410 223 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 GSTM3P21266 225 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 STOMP27105 288 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 APEX1P27695 318 aaKnown RBP9.44□□□□□ -0.9
USP49-204ENST00000423567 CENPAP49450 140 aa9.44□□□□□ -0.9
USP49-204ENST00000423567 EVX1P49640 407 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms