RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 IGHV3-13P01766 116 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 IGHV2-5P01817 119 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF32P17041 273 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 TNFRSF1BP20333 461 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 GDI2P50395 445 aaKnown RBP13.75□□□□□ -0.21
COL18A1-205ENST00000423214 CRYBA2P53672 197 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 FMODQ06828 376 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 SGCAQ16586 387 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 DCAF12L2Q5VW00 463 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 CALHM3Q86XJ0 350 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
COL18A1-205ENST00000423214 NSMAFQ92636 917 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF583Q96ND8 569 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 SEPHS2Q99611 448 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 RIMS3Q9UJD0 308 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 MED31Q9Y3C7 131 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 CAPN7Q9Y6W3 813 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 NPIPB13A6NJU9 1138 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 NPIPB4C9JG80 1138 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 SPRY3O43610 288 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 PLPP2O43688 288 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 NPPAP01160 153 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 IFNA14P01570 189 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF133P52736 654 aaPredicted RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 HILS1P60008 231 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 ERVK-25P63136 954 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 LRRC23Q53EV4 343 aaPredicted RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 C1QL2Q7Z5L3 287 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF101Q8IZC7 436 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 PCYOX1LQ8NBM8 494 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 MOSPD2Q8NHP6 518 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 GCDHQ92947 438 aaPredicted RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 NABP1Q96AH0 204 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 RCN3Q96D15 328 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 ZMYND19Q96E35 227 aaPredicted RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 RBM4Q9BWF3 364 aaKnown RBP13.74□□□□□ -0.21
COL18A1-205ENST00000423214 EGLN1Q9GZT9 426 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 C20orf141Q9NUB4 165 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 MRGBPQ9NV56 204 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 GID8Q9NWU2 228 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 UGT2A1Q9Y4X1 527 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 CACNG2Q9Y698 323 aa13.74□□□□□ -0.21
COL18A1-205ENST00000423214 DOCK11Q5JSL3 2073 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 J3QLI3 93 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 DEAF1O75398 565 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 MAKP20794 623 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 IFNA8P32881 189 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 MPV17P39210 176 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 WNT5AP41221 380 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 GUCA1AP43080 201 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 SLC3A1Q07837 685 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 PIN1Q13526 163 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 TAF11Q15544 211 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ALG10Q5BKT4 473 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ZMAT1Q5H9K5 638 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ARMC4Q5T2S8 1044 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 RFPL4BQ6ZWI9 263 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 USP43Q70EL4 1123 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 PEG10Q86TG7 708 aaKnown RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 BPIFB2Q8N4F0 458 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 AKR7LQ8NHP1 331 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 SLC25A40Q8TBP6 338 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 CCL17Q92583 94 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 HDAC2Q92769 488 aaKnown RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 TMPRSS13Q9BYE2 586 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 TXNIPQ9H3M7 391 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
COL18A1-205ENST00000423214 GMPR2Q9P2T1 348 aaKnown RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 CGGBP1Q9UFW8 167 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-205ENST00000423214 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 A0A1W2PPL8 197 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 H3BSA7 217 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 IGHV1-46P01743 117 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 THRBP10828 461 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 GATA3P23771 443 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 OR1E2P47887 323 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 LIMS1P48059 325 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 PPP1CBP62140 327 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 THEM4Q5T1C6 240 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
COL18A1-205ENST00000423214 C1orf174Q8IYL3 243 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 C3orf56Q8N813 242 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 NANPQ8TBE9 248 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 FNDC8Q8TC99 324 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 ST7LQ8TDW4 575 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 FAM216AQ8WUB2 273 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 LIPHQ8WWY8 451 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 MARS2Q96GW9 593 aaKnown RBP13.72□□□□□ -0.21
COL18A1-205ENST00000423214 ELAC2Q9BQ52 826 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms