RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TMEM221A6NGB7 291 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 GJE1A6NN92 205 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PRAF2O60831 178 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 UMODP07911 640 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 CD37P11049 281 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FAUP35544 74 aaKnown RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 KIR3DL2P43630 455 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 MELKQ14680 651 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 LINGO2Q7L985 606 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TMPRSS12Q86WS5 348 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ZBTB44Q8NCP5 570 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ST7LQ8TDW4 575 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FCAMRQ8WWV6 532 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC25A38Q96DW6 304 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ZNF486Q96H40 463 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 OXGR1Q96P68 337 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 GFI1Q99684 422 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC25A18Q9H1K4 315 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 COA3Q9Y2R0 106 aaPredicted RBP13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FREM3P0C091 2139 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NSG1A0A0A6YYJ2 146 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 A0A0B4J293 547 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SLC17A2O00624 439 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KRT33AO76009 404 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 POU4F3Q15319 338 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 HES5Q5TA89 166 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DNM1P46Q6ZS02 220 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DTWD2Q8NBA8 298 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR56B4Q8NH76 319 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SYNPRQ8TBG9 265 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PTX4Q96A99 478 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 RNF31Q96EP0 1072 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TMEM41AQ96HV5 264 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR2M2Q96R28 347 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 C1orf198Q9H425 327 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PRDM6Q9NQX0 595 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 B3GAT1Q9P2W7 334 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR5V1Q9UGF6 321 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ALG5Q9Y673 324 aa13.02□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LAMA1P25391 3075 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 COL27A1Q8IZC6 1860 aaPredicted RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 AQP7P3A6NL99 342 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 H3BML4 177 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 XRCC3O43542 346 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LAP3P28838 519 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GDNFP39905 211 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MRPS15P82914 257 aaKnown RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CHAF1BQ13112 559 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 MAB21L1Q13394 359 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SNTB2Q13425 540 aaKnown RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CARTPTQ16568 116 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LCN10Q6JVE6 187 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ANKRD16Q6P6B7 361 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KLHL24Q6TFL4 600 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NCCRP1Q6ZVX7 275 aaPredicted RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FGD2Q7Z6J4 655 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 WDSUB1Q8N9V3 476 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PMEPA1Q969W9 287 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZFP3Q96NJ6 502 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 AMELYQ99218 206 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 GTPBP2Q9BX10 602 aaKnown RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 DIABLOQ9NR28 239 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ANKRD10Q9NXR5 420 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 STMN3Q9NZ72 180 aa13.01□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 LOC100289279A0A1B0GTE1 492 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 TRAF3IP2O43734 574 aaPredicted RBP13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SCGNO76038 276 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PGA4P0DJD7 388 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 PGA3P0DJD8 388 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ZNF28P17035 718 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ADRA2CP18825 462 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 BTCP35070 178 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 SOX2P48431 317 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 BIDP55957 195 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CLRN1P58418 232 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 CSNK2A1P68400 391 aaPredicted RBP13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 KCNMB1Q16558 191 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OLFML2AQ68BL7 652 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 NHLRC1Q6VVB1 395 aa13□□□□□ -0.33
HLA-DPA1-242ENST00000419277 ASB18Q6ZVZ8 466 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms