RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC25A40Q8TBP6 338 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 IPCEF1Q8WWN9 437 aaPredicted RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 NSMAFQ92636 917 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 ELMOD3Q96FG2 381 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 TIMD4Q96H15 378 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 POLR2J2Q9GZM3 115 aaKnown RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 TXNIPQ9H3M7 391 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 NPHS2Q9NP85 383 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 STX18Q9P2W9 335 aaKnown RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 EIF3KQ9UBQ5 218 aaKnown RBP12.58□□□□□ -0.4
RPS28-201ENST00000417088 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
RPS28-201ENST00000417088 MGAM2Q2M2H8 2515 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 UBOX5O94941 541 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 ADRA2CP18825 462 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 GDI2P50395 445 aaKnown RBP12.57□□□□□ -0.4
RPS28-201ENST00000417088 ERVK-25P63136 954 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 CD47Q08722 323 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 CYLC2Q14093 348 aaPredicted RBP12.57□□□□□ -0.4
RPS28-201ENST00000417088 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 DCAF12L2Q5VW00 463 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 MBNL2Q5VZF2 373 aaKnown RBP12.57□□□□□ -0.4
RPS28-201ENST00000417088 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
RPS28-201ENST00000417088 CCL17Q92583 94 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 MAGEB18Q96M61 343 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 JMJD8Q96S16 334 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 RBM4Q9BWF3 364 aaKnown RBP12.57□□□□□ -0.4
RPS28-201ENST00000417088 OR2J1Q9GZK6 312 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 WNT5BQ9H1J7 359 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
RPS28-201ENST00000417088 PLSCR5A0PG75 271 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 ZSCAN5BA6NJL1 495 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 FXYD1O00168 92 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 SPRY1O43609 319 aaPredicted RBP12.56□□□□□ -0.4
RPS28-201ENST00000417088 EDF1O60869 148 aaKnown RBP12.56□□□□□ -0.4
RPS28-201ENST00000417088 ADH4P08319 380 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 THRBP10828 461 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 OR1E2P47887 323 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 ALG10Q5BKT4 473 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 METTL21CQ5VZV1 264 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 UNQ6126/PRO20091Q6UXV3 157 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 RFPL4BQ6ZWI9 263 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 CLDN22Q8N7P3 220 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 C3orf56Q8N813 242 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 OR8J3Q8NGG0 315 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 NANPQ8TBE9 248 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 SLC6A7Q99884 636 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 ECSITQ9BQ95 431 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 SUCNR1Q9BXA5 334 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 OPN4Q9UHM6 478 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 KLHL21Q9UJP4 597 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
RPS28-201ENST00000417088 A0A0G2JND7 137 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 GMNCA6NCL1 334 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 PIP5K1CO60331 668 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ICMTO60725 284 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 NGFP01138 241 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 FSHBP01225 129 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 CST2P09228 141 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 NR2C1P13056 603 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 EGR1P18146 543 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 GATA3P23771 443 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 LAP3P28838 519 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 LIMS1P48059 325 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
RPS28-201ENST00000417088 PPP1CBP62140 327 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
RPS28-201ENST00000417088 TAF11Q15544 211 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ZNF771Q7L3S4 317 aaPredicted RBP12.55□□□□□ -0.4
RPS28-201ENST00000417088 C1orf174Q8IYL3 243 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ALDH16A1Q8IZ83 802 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ABHD4Q8TB40 342 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 RBP7Q96R05 134 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ALG12Q9BV10 488 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 EGLN1Q9GZT9 426 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 CYSLTR2Q9NS75 346 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
RPS28-201ENST00000417088 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
RPS28-201ENST00000417088 IFNA14P01570 189 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 CD55P08174 381 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 LIPAP38571 399 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 LCN2P80188 198 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 SLC3A1Q07837 685 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
RPS28-201ENST00000417088 CYBRD1Q53TN4 286 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 ERICH5Q6P6B1 374 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 IGFN1Q86VF2 1251 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 BPIFB2Q8N4F0 458 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms