RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ZNF404Q494X3 552 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SYT14P1Q58G82 188 aa2.31□□□□□ -2.04
APP-207ENST00000415997 C9orf66Q5T8R8 295 aa2.31□□□□□ -2.04
APP-207ENST00000415997 IL23RQ5VWK5 629 aa2.31□□□□□ -2.04
APP-207ENST00000415997 PRAMEF8Q5VWM4 474 aa2.31□□□□□ -2.04
APP-207ENST00000415997 PRAMEF7Q5VXH5 474 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SLC27A4Q6P1M0 643 aa2.31□□□□□ -2.04
APP-207ENST00000415997 MZT2AQ6P582 158 aa2.31□□□□□ -2.04
APP-207ENST00000415997 KCTD18Q6PI47 426 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 C10orf99Q6UWK7 81 aa2.31□□□□□ -2.04
APP-207ENST00000415997 C16orf89Q6UX73 402 aa2.31□□□□□ -2.04
APP-207ENST00000415997 LRIG3Q6UXM1 1119 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SLC16A12Q6ZSM3 486 aa2.31□□□□□ -2.04
APP-207ENST00000415997 C16orf82Q7Z2V1 217 aa2.31□□□□□ -2.04
APP-207ENST00000415997 DENND6AQ8IWF6 608 aa2.31□□□□□ -2.04
APP-207ENST00000415997 KATNAL2Q8IYT4 538 aa2.31□□□□□ -2.04
APP-207ENST00000415997 MYO1HQ8N1T3 1032 aa2.31□□□□□ -2.04
APP-207ENST00000415997 RNF175Q8N4F7 328 aa2.31□□□□□ -2.04
APP-207ENST00000415997 PAQR4Q8N4S7 273 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 ZNF614Q8N883 585 aa2.31□□□□□ -2.04
APP-207ENST00000415997 MLKLQ8NB16 471 aa2.31□□□□□ -2.04
APP-207ENST00000415997 ATP6V1C2Q8NEY4 427 aa2.31□□□□□ -2.04
APP-207ENST00000415997 HUS1BQ8NHY5 278 aa2.31□□□□□ -2.04
APP-207ENST00000415997 ZNF519Q8TB69 540 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SLC35G2Q8TBE7 412 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SYNPRQ8TBG9 265 aa2.31□□□□□ -2.04
APP-207ENST00000415997 C17orf50Q8WW18 174 aa2.31□□□□□ -2.04
APP-207ENST00000415997 MAIP1Q8WWC4 291 aa2.31□□□□□ -2.04
APP-207ENST00000415997 TNFRSF14Q92956 283 aa2.31□□□□□ -2.04
APP-207ENST00000415997 LRRC39Q96DD0 335 aa2.31□□□□□ -2.04
APP-207ENST00000415997 AURKBQ96GD4 344 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 SH3YL1Q96HL8 342 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 URB1-AS1Q96HZ7 61 aa2.31□□□□□ -2.04
APP-207ENST00000415997 PLEKHA8Q96JA3 519 aa2.31□□□□□ -2.04
APP-207ENST00000415997 ZNF385AQ96PM9 386 aaKnown RBP2.31□□□□□ -2.04
APP-207ENST00000415997 ALKBH3Q96Q83 286 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 OR5B2Q96R09 309 aa2.31□□□□□ -2.04
APP-207ENST00000415997 TMEM246Q9BRR3 403 aa2.31□□□□□ -2.04
APP-207ENST00000415997 LMF2Q9BU23 707 aaKnown RBP2.31□□□□□ -2.04
APP-207ENST00000415997 C1QTNF4Q9BXJ3 329 aa2.31□□□□□ -2.04
APP-207ENST00000415997 LINC00470Q9BZP3 86 aa2.31□□□□□ -2.04
APP-207ENST00000415997 SLC25A32Q9H2D1 315 aa2.31□□□□□ -2.04
APP-207ENST00000415997 CCDC68Q9H2F9 335 aa2.31□□□□□ -2.04
APP-207ENST00000415997 KRCC1Q9NPI7 259 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 GRHL1Q9NZI5 618 aa2.31□□□□□ -2.04
APP-207ENST00000415997 KIAA1456Q9P272 454 aa2.31□□□□□ -2.04
APP-207ENST00000415997 CTNNAL1Q9UBT7 734 aa2.31□□□□□ -2.04
APP-207ENST00000415997 MIOXQ9UGB7 285 aa2.31□□□□□ -2.04
APP-207ENST00000415997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.31□□□□□ -2.04
APP-207ENST00000415997 RCE1Q9Y256 329 aa2.31□□□□□ -2.04
APP-207ENST00000415997 CAB39Q9Y376 341 aaPredicted RBP2.31□□□□□ -2.04
APP-207ENST00000415997 A0A1B0GUV1 79 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CCDC189A1A4V9 331 aa2.3□□□□□ -2.04
APP-207ENST00000415997 VGLL3A8MV65 326 aa2.3□□□□□ -2.04
APP-207ENST00000415997 FBP2O00757 339 aa2.3□□□□□ -2.04
APP-207ENST00000415997 TPD52L2O43399 206 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 SPRY3O43610 288 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GLRA3O75311 464 aa2.3□□□□□ -2.04
APP-207ENST00000415997 UPK3AO75631 287 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GAS8O95995 478 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OTCP00480 354 aa2.3□□□□□ -2.04
APP-207ENST00000415997 HLA-HP01893 362 aa2.3□□□□□ -2.04
APP-207ENST00000415997 IFNA6P05013 189 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GABRB3P28472 473 aa2.3□□□□□ -2.04
APP-207ENST00000415997 SAA4P35542 130 aa2.3□□□□□ -2.04
APP-207ENST00000415997 SLC1A2P43004 574 aa2.3□□□□□ -2.04
APP-207ENST00000415997 P2RY4P51582 365 aa2.3□□□□□ -2.04
APP-207ENST00000415997 RAP1GDS1P52306 607 aa2.3□□□□□ -2.04
APP-207ENST00000415997 PSMD4P55036 377 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 UBASH3AP57075 661 aa2.3□□□□□ -2.04
APP-207ENST00000415997 EIF3EP60228 445 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 ERVS71-1P61550 626 aa2.3□□□□□ -2.04
APP-207ENST00000415997 RPL23AP62750 156 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 ARF1P84077 181 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 KLHL30Q0D2K2 578 aa2.3□□□□□ -2.04
APP-207ENST00000415997 PDE7AQ13946 482 aa2.3□□□□□ -2.04
APP-207ENST00000415997 LY6EQ16553 131 aa2.3□□□□□ -2.04
APP-207ENST00000415997 MOGQ16653 247 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GSG1Q2KHT4 349 aa2.3□□□□□ -2.04
APP-207ENST00000415997 TRMT5Q32P41 509 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 CDONQ4KMG0 1287 aa2.3□□□□□ -2.04
APP-207ENST00000415997 PAGE2BQ5JRK9 111 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GKAP1Q5VSY0 366 aaPredicted RBP2.3□□□□□ -2.04
APP-207ENST00000415997 METTL11BQ5VVY1 283 aa2.3□□□□□ -2.04
APP-207ENST00000415997 ARMC3Q5W041 872 aa2.3□□□□□ -2.04
APP-207ENST00000415997 FAM180BQ6P0A1 224 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CYP20A1Q6UW02 462 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CREB3L2Q70SY1 520 aa2.3□□□□□ -2.04
APP-207ENST00000415997 AAED1Q7RTV5 226 aa2.3□□□□□ -2.04
APP-207ENST00000415997 VMO1Q7Z5L0 202 aa2.3□□□□□ -2.04
APP-207ENST00000415997 MTERF4Q7Z6M4 381 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 PTOV1Q86YD1 416 aa2.3□□□□□ -2.04
APP-207ENST00000415997 PDZD9Q8IXQ8 264 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CADM3Q8N126 398 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR2L13Q8N349 312 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GATSQ8NAP1 163 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR9K2Q8NGE7 335 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR51D1Q8NGF3 324 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR8B3Q8NGG8 313 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR9A2Q8NGT5 310 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms