RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 OR2J1Q9GZK6 312 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 PCDHAC1Q9H158 963 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 SMURF2Q9HAU4 748 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 PATZ1Q9HBE1 687 aaKnown RBP12.99□□□□□ -0.33
DDX56-202ENST00000415758 NPHS2Q9NP85 383 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 ANGPT4Q9Y264 503 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 A0A0G2JK05 382 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 TRAPPC13A5PLN9 417 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 M0QX08 132 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 TRMUO75648 421 aaKnown RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 SBK2P0C263 348 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 ZNF32P17041 273 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 UGT2B15P54855 530 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 STX1BP61266 288 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 PSG4Q00888 419 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 RPL18Q07020 188 aaKnown RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 SPRNQ5BIV9 151 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 ZMAT1Q5H9K5 638 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 SPATA46Q5T0L3 261 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 C9orf139Q6ZV77 190 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 ZNF771Q7L3S4 317 aaPredicted RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 TSPYL5Q86VY4 417 aaPredicted RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 LRRC28Q86X40 367 aaPredicted RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 PTOV1Q86YD1 416 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 SPICQ8N5J4 248 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 ZNF283Q8N7M2 679 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 OR4D11Q8NGI4 311 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 GEMIN6Q8WXD5 167 aaKnown RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 NMD3Q96D46 503 aaKnown RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 CCNB1IP1Q9NPC3 277 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
DDX56-202ENST00000415758 CCDC167Q9P0B6 97 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 EGFL7Q9UHF1 273 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 UGT2A1Q9Y4X1 527 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
DDX56-202ENST00000415758 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 F13BP05160 661 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 PPIAL4GP0DN37 164 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 UMPSP11172 480 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 GDI2P50395 445 aaKnown RBP12.97□□□□□ -0.33
DDX56-202ENST00000415758 PAX8Q06710 450 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 SLC9A3R2Q15599 337 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 MIDNQ504T8 468 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 ARMC4Q5T2S8 1044 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 DLEU7Q6UYE1 221 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 RBM45Q8IUH3 476 aaKnown RBP12.97□□□□□ -0.33
DDX56-202ENST00000415758 C11orf65Q8NCR3 313 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 SAMD8Q96LT4 415 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 CPPED1Q9BRF8 314 aaPredicted RBP12.97□□□□□ -0.33
DDX56-202ENST00000415758 MRI1Q9BV20 369 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 DCAF16Q9NXF7 216 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
DDX56-202ENST00000415758 MMP24Q9Y5R2 645 aa12.97□□□□□ -0.33
DDX56-202ENST00000415758 NPIPB13A6NJU9 1138 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 NPIPB4C9JG80 1138 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 MCIDASD6RGH6 385 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 F5H0A9 414 aaPredicted RBP12.96□□□□□ -0.33
DDX56-202ENST00000415758 KPNA4O00629 521 aaPredicted RBP12.96□□□□□ -0.33
DDX56-202ENST00000415758 TGDSO95455 350 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 NGFP01138 241 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 IGF2P01344 180 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 MT-ND1P03886 318 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 CDAP32320 146 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
DDX56-202ENST00000415758 PPP1CBP62140 327 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 TNFAIP6P98066 277 aaPredicted RBP12.96□□□□□ -0.33
DDX56-202ENST00000415758 RUNDC3AQ59EK9 446 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 MTX3Q5HYI7 312 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 LEG1Q6P5S2 330 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 RFPL4BQ6ZWI9 263 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 AKR7LQ8NHP1 331 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 DCLRE1CQ96SD1 692 aaKnown RBP12.96□□□□□ -0.33
DDX56-202ENST00000415758 MSL2Q9HCI7 577 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 INIPQ9NRY2 104 aa12.96□□□□□ -0.33
DDX56-202ENST00000415758 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 SLC2A10O95528 541 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 OPN1SWP03999 348 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
DDX56-202ENST00000415758 FUT1P19526 365 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 TUBG1P23258 451 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 CPT2P23786 658 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 MTNR1AP48039 350 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 SEC61A1P61619 476 aaKnown RBP12.95□□□□□ -0.34
DDX56-202ENST00000415758 PAX2Q02962 417 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 PSG7Q13046 419 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 C16orf87Q6PH81 154 aa12.95□□□□□ -0.34
DDX56-202ENST00000415758 SLC25A47Q6Q0C1 308 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms