RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 IP6K3Q96PC2 410 aa18.52■□□□□ 0.55
AP1S3-205ENST00000415298 PLXND1Q9Y4D7 1925 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 TMEM269A0A1B0GVZ9 245 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CD8B2A6NJW9 211 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 SUPT3HB4E1H0 165 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CD5P06127 495 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CD8BP10966 210 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 HOXB9P17482 250 aaPredicted RBP18.51■□□□□ 0.55
AP1S3-205ENST00000415298 GABRR1P24046 479 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 TEAD1P28347 426 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 EFNB1P98172 346 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ZNF542PQ5EBM4 170 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CRB2Q5IJ48 1285 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ZBTB2Q8N680 514 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 OR8J1Q8NGP2 316 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 OR10R2Q8NGX6 335 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 NUDCD2Q8WVJ2 157 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CSTL1Q9H114 145 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 NMNAT1Q9HAN9 279 aaPredicted RBP18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CBLN4Q9NTU7 201 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 MRPL15Q9P015 296 aaKnown RBP18.51■□□□□ 0.55
AP1S3-205ENST00000415298 TNFSF18Q9UNG2 199 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 HS3ST3A1Q9Y663 406 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 TDRD6O60522 2096 aaKnown RBP18.51■□□□□ 0.55
AP1S3-205ENST00000415298 SPAG17Q6Q759 2223 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 KCNK5O95279 499 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ERVFC1-1P60608 527 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 RNF151Q2KHN1 245 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 TAF8Q7Z7C8 310 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CD163Q86VB7 1156 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 RGL4Q8IZJ4 473 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ARSGQ96EG1 525 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ASB6Q9NWX5 421 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 CAMK2AQ9UQM7 478 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 SLC17A4Q9Y2C5 497 aa18.51■□□□□ 0.55
AP1S3-205ENST00000415298 ANKRD61A6NGH8 418 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 NKX6-3A6NJ46 265 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 ERCC1P07992 297 aaPredicted RBP18.5■□□□□ 0.55
AP1S3-205ENST00000415298 GALP22466 123 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 CD27P26842 260 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 IFNGR2P38484 337 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 HEPACAMQ14CZ8 416 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 MST1LQ2TV78 715 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 IL27RAQ6UWB1 636 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 DHRS11Q6UWP2 260 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 FAM83HQ6ZRV2 1179 aaPredicted RBP18.5■□□□□ 0.55
AP1S3-205ENST00000415298 OR1E3Q8WZA6 343 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 PUS1Q9Y606 427 aaKnown RBP eCLIP18.5■□□□□ 0.55
AP1S3-205ENST00000415298 FEN1P39748 380 aaKnown RBP18.5■□□□□ 0.55
AP1S3-205ENST00000415298 CCR8P51685 355 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 IL2P60568 153 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 NKX6-1P78426 367 aaPredicted RBP18.5■□□□□ 0.55
AP1S3-205ENST00000415298 INSL4Q14641 139 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 GGNBP1Q5YKI7 109 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 APOOLQ6UXV4 268 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 C1QTNF3Q9BXJ4 246 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 POPDC3Q9HBV1 291 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 CHST11Q9NPF2 352 aa18.5■□□□□ 0.55
AP1S3-205ENST00000415298 F5H0A9 414 aaPredicted RBP18.49■□□□□ 0.55
AP1S3-205ENST00000415298 AHSA1O95433 338 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 S100A7P31151 101 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 SULT1A1P50225 295 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTBP60709 375 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTA2P62736 377 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTG1P63261 375 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTG2P63267 376 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTC1P68032 377 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ACTA1P68133 377 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 NFATC4Q14934 902 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ZNF658BQ4V348 819 aaPredicted RBP18.49■□□□□ 0.55
AP1S3-205ENST00000415298 PRAMEF14Q5SWL7 426 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 GLT8D1Q68CQ7 371 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 WDR5BQ86VZ2 330 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 GPR34Q9UPC5 381 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 SLC5A10A0PJK1 596 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BKO60814 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 CD74P04233 296 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 ARG1P05089 322 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BJP06899 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BOP23527 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BBP33778 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 TAGLN2P37802 199 aaKnown RBP18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BDP58876 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BCP62807 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST2H2BEQ16778 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 LINC00303Q3SY05 128 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.49■□□□□ 0.55
AP1S3-205ENST00000415298 OR8G2PQ6IF36 304 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 NXPE4Q6UWF7 544 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 C1orf122Q6ZSJ8 110 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 BCDIN3DQ7Z5W3 292 aaKnown RBP18.49■□□□□ 0.55
AP1S3-205ENST00000415298 C1orf216Q8TAB5 229 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 SPPL2AQ8TCT8 520 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HPSE2Q8WWQ2 592 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BHQ93079 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BNQ99877 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 HIST1H2BMQ99879 126 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 SULT4A1Q9BR01 284 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 DOHHQ9BU89 302 aa18.49■□□□□ 0.55
AP1S3-205ENST00000415298 AUNIPQ9H7T9 357 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms